GOToolBox: functional analysis of gene datasets based on Gene Ontology - Wikidata - awgldk - TriplyDB

GOToolBox: functional analysis of gene datasets based on Gene Ontology

GOToolBox: functional analysis of gene datasets based on Gene Ontology

http://www.wikidata.org/entity/Q24791245

about

Semantic similarity in biomedical ontologies IntelliGO: a new vector-based semantic similarity measure including annotation origin A systematic approach to infer biological relevance and biases of gene network structures.The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists Recent additions and improvements to the Onto-Tools.Theme discovery from gene lists for identification and viewing of multiple functional groups The Gene Set Builder: collation, curation, and distribution of sets of genes Modulatory communication signal performance is associated with a distinct neurogenomic state in honey bees TreeDyn: towards dynamic graphics and annotations for analyses of trees Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists Yeast toxicogenomics: genome-wide responses to chemical stresses with impact in environmental health, pharmacology, and biotechnology Ecological adaptation of diverse honey bee (Apis mellifera) populations Genomic targets of Brachyury (T) in differentiating mouse embryonic stem cells Functional cohesion of gene sets determined by latent semantic indexing of PubMed abstracts Network integration and graph analysis in mammalian molecular systems biology Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)Ten years of pathway analysis: current approaches and outstanding challenges WEGO: a web tool for plotting GO annotations Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets A literature-based similarity metric for biological processes.Gene-disease relationship discovery based on model-driven data integration and database view definition A Drosophila systems model of pentylenetetrazole induced locomotor plasticity responsive to antiepileptic drugs.Species differences in brain gene expression profiles associated with adult behavioral maturation in honey bees BicPAM: Pattern-based biclustering for biomedical data analysis.Revealing and avoiding bias in semantic similarity scores for protein pairs.Ontological analysis of gene expression data: current tools, limitations, and open problems.Functional integrative levels in the human interactome recapitulate organ organization.Comparative SILAC proteomic analysis of Trypanosoma brucei bloodstream and procyclic lifecycle stages.The LeFE algorithm: embracing the complexity of gene expression in the interpretation of microarray data BiC2PAM: constraint-guided biclustering for biological data analysis with domain knowledge.Bioinformatics Methods to Deduce Biological Interpretation from Proteomics Data.ProfCom: a web tool for profiling the complex functionality of gene groups identified from high-throughput data Bioinformatic tools for inferring functional information from plant microarray data II: Analysis beyond single gene.Microbial identification by mass cataloging.Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations.Genome-wide analysis of gene expression during early Arabidopsis flower development Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae Conservation of noncoding microsatellites in plants: implication for gene regulation.Thermal evolution of gene expression profiles in Drosophila subobscura.

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GOToolBox: functional analysis of gene datasets based on Gene Ontology

http://www.wikidata.org/entity/Q24791245

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2004 nî lūn-bûn

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2004年の論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年论文

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name

GOToolBox: functional analysis of gene datasets based on Gene Ontology

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GOToolBox: functional analysis of gene datasets based on Gene Ontology

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GOToolBox: functional analysis of gene datasets based on Gene Ontology

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GOToolBox: functional analysis of gene datasets based on Gene Ontology

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GOToolBox: functional analysis of gene datasets based on Gene Ontology

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GOToolBox: functional analysis of gene datasets based on Gene Ontology

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Bernard Jacq

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Christine Brun

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David Martin

http://www.w3.org/2001/XMLSchema#string

Elisabeth Remy

http://www.w3.org/2001/XMLSchema#string

Pierre Mouren

http://www.w3.org/2001/XMLSchema#string

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Gene ontology: tool for the unification of biology

WormBase: network access to the genome and biology of Caenorhabditis elegans

FunSpec: a web-based cluster interpreter for yeast.

GoMiner: a resource for biological interpretation of genomic and proteomic data

GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies

Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network

SGD: Saccharomyces Genome Database

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

GOstat: find statistically overrepresented Gene Ontologies within a group of genes

GeneMerge--post-genomic analysis, data mining, and hypothesis testing.

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