Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach - Wikidata - awgldk - TriplyDB

Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach

Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach

http://www.wikidata.org/entity/Q24804022

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Geometric interpretation of gene coexpression network analysis An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.A Glimpse to Background and Characteristics of Major Molecular Biological Networks Abasy Atlas: a comprehensive inventory of systems, global network properties and systems-level elements across bacteria.The exact Laplacian spectrum for the Dyson hierarchical network Comparing the Hierarchy of Keywords in On-Line News Portals Evolution of gene regulatory networks by fluctuating selection and intrinsic constraints Functional analysis of the integration host factor site of the σ(54) Pu promoter of Pseudomonas putida by in vivo UV imprinting.Architecture of the human regulatory network derived from ENCODE data Global network structure of dominance hierarchy of ant workers.Dynamic changes in subgraph preference profiles of crucial transcription factors A classification based framework for quantitative description of large-scale microarray data.Modular co-evolution of metabolic networks.The regulatory network of E. coli metabolism as a Boolean dynamical system exhibits both homeostasis and flexibility of response Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism.What determines the assembly of transcriptional network motifs in Escherichia coli?Hierarchical coordination of periodic genes in the cell cycle of Saccharomyces cerevisiae Predicting cell cycle regulated genes by causal interactions.Toward the dynamic interactome: it's about time.Construction and verification of the transcriptional regulatory response network of Streptococcus mutans upon treatment with the biofilm inhibitor carolacton HiNO: an approach for inferring hierarchical organization from regulatory networks.Physiological roles of ArcA, Crp, and EtrA and their interactive control on aerobic and anaerobic respiration in Shewanella oneidensis Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli.Analysis of diverse regulatory networks in a hierarchical context shows consistent tendencies for collaboration in the middle levels.Biological role of noise encoded in a genetic network motif.Robust detection of hierarchical communities from Escherichia coli gene expression data.Hierarchy measure for complex networks Functional annotation of hierarchical modularity Evolution of transcriptional regulation in closely related bacteria Profiling the transcription factor regulatory networks of human cell types.Extracting tag hierarchies.An approach for determining and measuring network hierarchy applied to comparing the phosphorylome and the regulome Hierarchical feedback modules and reaction hubs in cell signaling networks.Hierarchical decomposition of dynamically evolving regulatory networks.Hierarchy and feedback in the evolution of the Escherichia coli transcription network.Automated Identification of Core Regulatory Genes in Human Gene Regulatory Networks Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades.Sensing your surroundings: how transcription-regulatory networks of the cell discern environmental signals.Identification of key player genes in gene regulatory networks.

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Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach

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Hierarchical structure and mod ...... led by a new top-down approach

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Hierarchical structure and mod ...... led by a new top-down approach

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Hierarchical structure and mod ...... led by a new top-down approach

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An-Ping Zeng

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Hong-Wu Ma

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P2860

EcoGene: a genome sequence database for Escherichia coli K-12.

Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data

The modular era of functional genomics

Aggregation of topological motifs in the Escherichia coli transcriptional regulatory network

Transcriptional regulatory networks in Saccharomyces cerevisiae

Network biology: understanding the cell's functional organization

Network motifs: simple building blocks of complex networks

Network motifs in the transcriptional regulation network of Escherichia coli

TRANSFAC: transcriptional regulation, from patterns to profiles

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