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Bacterial epidemiology and biology - lessons from genome sequencing

Bacterial epidemiology and biology - lessons from genome sequencing

http://www.wikidata.org/entity/Q27499569

about

Short read sequence typing (SRST): multi-locus sequence types from short reads Bacterial genomic epidemiology, from local outbreak characterization to species-history reconstruction Ecological Opportunity, Evolution, and the Emergence of Flea-Borne Plague Whole-Genome Sequencing for the Investigation of a Hospital Outbreak of MRSA in China Routine use of microbial whole genome sequencing in diagnostic and public health microbiology Salmonella typhi Genomics: Envisaging the Future of Typhoid Eradication.FPSAC: fast phylogenetic scaffolding of ancient contigs.Transforming clinical microbiology with bacterial genome sequencing.snpTree--a web-server to identify and construct SNP trees from whole genome sequence data.An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella Predicting the virulence of MRSA from its genome sequence.Evolution of Drug-resistant Acinetobacter baumannii After DCD Renal Transplantation.The impact of coinfections and their simultaneous transmission on antigenic diversity and epidemic cycling of infectious diseases On the origin of Mycobacterium ulcerans, the causative agent of Buruli ulcer.KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes.Finished bacterial genomes from shotgun sequence data.MRSA transmission on a neonatal intensive care unit: epidemiological and genome-based phylogenetic analyses Methicillin susceptible Staphylococcus aureus (MSSA) of clonal complex CC398, t571 from infections in humans are still rare in Germany.Long term effect of gut microbiota transfer on diabetes development.Matrix-assisted laser desorption ionization-time of flight and comparative genomic analysis of M-18 group a Streptococcus strains associated with an acute rheumatic fever outbreak in northeast Italy in 2012 and 2013.Microevolution of Virulence-Related Genes in Helicobacter pylori Familial Infection.A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota.Genome Analysis of Listeria monocytogenes Sequence Type 8 Strains Persisting in Salmon and Poultry Processing Environments and Comparison with Related Strains.Whole-genome Sequencing for Tracing the Transmission Link between Two ARD Outbreaks Caused by a Novel HAdV Serotype 7 Variant, China Genomic Epidemiology of a Protracted Hospital Outbreak Caused by a Toxin A-Negative Clostridium difficile Sublineage PCR Ribotype 017 Strain in London, England Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing.Lambda Red-mediated Recombineering in the Attaching and Effacing Pathogen Escherichia albertii Phylogeny, resistome and mobile genetic elements of emergent OXA-48 and OXA-245 Klebsiella pneumoniae clones circulating in Spain Two-dimensional gel electrophoresis in bacterial proteomics.Understanding and managing zoonotic risk in the new livestock industries.Evolution and transmission of drug-resistant tuberculosis in a Russian population.The continually evolving Clostridium difficile species.Challenges of metagenomics and single-cell genomics approaches for exploring cyanobacterial diversity.Coevolution of the Organization and Structure of Prokaryotic Genomes.A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis.Live genomics for pathogen monitoring in public health.Transmission of the gut microbiota: spreading of health.The spread of KPC-producing Enterobacteriaceae in Spain: WGS analysis of the emerging high-risk clones of Klebsiella pneumoniae ST11/KPC-2, ST101/KPC-2 and ST512/KPC-3.MRSA Transmission Dynamics Among Interconnected Acute, Intermediate-Term, and Long-Term Healthcare Facilities in Singapore.Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites.

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Bacterial epidemiology and biology - lessons from genome sequencing

http://www.wikidata.org/entity/Q27499569

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2011 nî lūn-bûn

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2011 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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2011 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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type

label

Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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Bacterial epidemiology and biology - lessons from genome sequencing

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P2860

Distinct clones of Yersinia pestis caused the black death

Microevolution and history of the plague bacillus, Yersinia pestis

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

Evolutionary dynamics of Clostridium difficile over short and long time scales

Molecular complexity of successive bacterial epidemics deconvoluted by comparative pathogenomics

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

Statistical methods for detecting molecular adaptation

Comparisons of dN/dS are time dependent for closely related bacterial genomes

The origin of the Haitian cholera outbreak strain

The peopling of the Pacific from a bacterial perspective

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gb-2011-12-10-230

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scholarly article

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10.1186/GB-2011-12-10-230

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Julian Parkhill

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bacterial infectious disease

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