Detection and removal of biases in the analysis of next-generation sequencing reads.
about
Chromatin accessibility data sets show bias due to sequence specificity of the DNase I enzymeUncovering correlated variability in epigenomic datasets using the Karhunen-Loeve transformDiscovery of active enhancers through bidirectional expression of short transcriptsSystematic identification of rhythmic genes reveals camk1gb as a new element in the circadian clockworkAnalysis of the transcriptome in molecular epidemiology studiesPattern Recognition on Read Positioning in Next Generation Sequencing.Non-random DNA fragmentation in next-generation sequencing.New insights from existing sequence data: generating breakthroughs without a pipetteGLiMMPS: robust statistical model for regulatory variation of alternative splicing using RNA-seq data.rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq dataDifferential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads.A Quantitative Profiling Tool for Diverse Genomic Data Types Reveals Potential Associations between Chromatin and Pre-mRNA Processing.BIDCHIPS: bias decomposition and removal from ChIP-seq data clarifies true binding signal and its functional correlates.Clinical impact of small TP53 mutated subclones in chronic lymphocytic leukemia.An RNA-Seq strategy to detect the complete coding and non-coding transcriptome including full-length imprinted macro ncRNAs.MATS: a Bayesian framework for flexible detection of differential alternative splicing from RNA-Seq data.Biases in read coverage demonstrated by interlaboratory and interplatform comparison of 117 mRNA and genome sequencing experiments.Modelling and simulating generic RNA-Seq experiments with the flux simulator.MOCAT: a metagenomics assembly and gene prediction toolkitComparison of sequencing platforms for single nucleotide variant calls in a human sample.ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions.The hot pepper (Capsicum annuum) microRNA transcriptome reveals novel and conserved targets: a foundation for understanding MicroRNA functional roles in hot pepper.Consistent errors in first strand cDNA due to random hexamer mispriming.Relationship between nucleosome positioning and progesterone-induced alternative splicing in breast cancer cells.Life history correlates of fecal bacterial species richness in a wild population of the blue tit Cyanistes caeruleus.High-resolution transcriptome analysis with long-read RNA sequencing.Future medical applications of single-cell sequencing in cancer.Bayesian Hierarchical Model for Differential Gene Expression Using RNA-seq DataSiNG-PCRseq: Accurate inter-sequence quantification achieved by spiking-in a neighbor genome for competitive PCR amplicon sequencing.A semi-parametric statistical model for integrating gene expression profiles across different platforms.A new strategy to reduce allelic bias in RNA-Seq readmapping.Global analyses of endonucleolytic cleavage in mammals reveal expanded repertoires of cleavage-inducing small RNAs and their targetsThe detection of microRNA associated with Alzheimer's disease in biological fluids using next-generation sequencing technologies.Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic featuresComprehensive next-generation cancer genome sequencing in the era of targeted therapy and personalized oncology.Whole cancer genome sequencing by next-generation methods.Computer simulations: tools for population and evolutionary genetics.Next generation quantitative genetics in plantsCorrecting nucleotide-specific biases in high-throughput sequencing data.RECQL5 controls transcript elongation and suppresses genome instability associated with transcription stress
P2860
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P2860
Detection and removal of biases in the analysis of next-generation sequencing reads.
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Detection and removal of biases in the analysis of next-generation sequencing reads.
@ast
Detection and removal of biases in the analysis of next-generation sequencing reads.
@en
type
label
Detection and removal of biases in the analysis of next-generation sequencing reads.
@ast
Detection and removal of biases in the analysis of next-generation sequencing reads.
@en
prefLabel
Detection and removal of biases in the analysis of next-generation sequencing reads.
@ast
Detection and removal of biases in the analysis of next-generation sequencing reads.
@en
P2860
P1433
P1476
Detection and removal of biases in the analysis of next-generation sequencing reads.
@en
P2093
P2860
P304
P356
10.1371/JOURNAL.PONE.0016685
P407
P577
2011-01-31T00:00:00Z