Prediction of RNA secondary structure, including pseudoknotting, by computer simulation. - Wikidata - awgldk - TriplyDB

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

http://www.wikidata.org/entity/Q40516648

about

Kinefold web server for RNA/DNA folding path and structure prediction including pseudoknots and knots RAGA: RNA sequence alignment by genetic algorithm DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model Tfold: efficient in silico prediction of non-coding RNA secondary structures TurboKnot: rapid prediction of conserved RNA secondary structures including pseudoknots A novel RNA product of the tyrT operon of Escherichia coli Automatic detection of conserved RNA structure elements in complete RNA virus genomes The bovine leukemia virus encapsidation signal is discontinuous and extends into the 5' end of the gag gene KnotSeeker: heuristic pseudoknot detection in long RNA sequences.Porcine reproductive and respiratory syndrome virus comparison: divergent evolution on two continents.Sufficient length of a poly(A) tail for the formation of a potential pseudoknot is required for efficient replication of bamboo mosaic potexvirus RNA.A predictive model for secondary RNA structure using graph theory and a neural network.The bovine leukemia virus encapsidation signal is composed of RNA secondary structures.Control of ribosomal protein L1 synthesis in mesophilic and thermophilic archaea Thermodynamics of RNA structures by Wang-Landau sampling.ProbKnot: fast prediction of RNA secondary structure including pseudoknots.The synthesis of minus-strand RNA of bamboo mosaic potexvirus initiates from multiple sites within the poly(A) tail.Sequences involved in the dimerisation of human T cell leukaemia virus type-1 RNA.SSCP primer design based on single-strand DNA structure predicted by a DNA folding program.Advances in RNA structure prediction from sequence: new tools for generating hypotheses about viral RNA structure-function relationships A vector library for silencing central carbon metabolism genes with antisense RNAs in Escherichia coli.The function of circadian RNA-binding proteins and their cis-acting elements in microalgae.Circadian expression of the luciferin-binding protein correlates with the binding of a protein to the 3' untranslated region of its mRNA Modeling RNA folding paths with pseudoknots: application to hepatitis delta virus ribozyme.The 3' untranslated region of picornavirus RNA: features required for efficient genome replication.The turnip yellow mosaic virus tRNA-like structure cannot be replaced by generic tRNA-like elements or by heterologous 3' untranslated regions known to enhance mRNA expression and stability.An RNA stem-loop structure directs hepatitis B virus genomic RNA encapsidation.Statistical thermodynamics for chain molecules with simple RNA tertiary contacts.RNA folding: conformational statistics, folding kinetics, and ion electrostatics.Aconitase-mediated posttranscriptional regulation of Helicobacter pylori peptidoglycan deacetylase.A determinant of disease symptom severity is located in the 3'-terminal noncoding region of the RNA of a plant virus.The Tn10-encoded tetracycline resistance mRNA contains a translational silencer in the 5' nontranslated region.PseudoBase: structural information on RNA pseudoknots In Silico Prediction of RNA Secondary Structure.Classifying multigraph models of secondary RNA structure using graph-theoretic descriptors.PseudoBase: a database with RNA pseudoknots.Folding thermodynamics of pseudoknotted chain conformations.Evolution of bacteriophage in continuous culture: a model system to test antiviral gene therapies for the emergence of phage escape mutants.Molecular beacon probes combined with amplification by NASBA enable homogeneous, real-time detection of RNA Characterization of defective RNAs derived from RNA 3 of the Fny strain of cucumber mosaic cucumovirus.

P2860

Q24530528-D5F6A8B8-C6B8-4C70-A643-C2A1444C99AE Q24545691-BB0A9E97-F4AF-4110-909E-A46A5DAB5AA2 Q24597768-9C492E7C-E50A-4983-80D0-A867BD9C23B0 Q24597807-650AD226-BC32-4818-845D-437D38C68DCB Q24614901-674F3007-F951-4C6B-AF98-6333C404CDA0 Q24629199-9B255215-216B-4246-B639-AC24F6194472 Q27473247-6F8288E9-58B0-4664-AF77-5B9FF11066D7 Q28301200-6EF52EAF-ACC9-46B5-AC63-09805887E300 Q33322069-7705E273-EF97-42D1-BB00-3EDEE088F1D2 Q33639136-DC8EDE91-523E-49A9-9C63-67D21287E98E Q33643068-E3DECE54-9D8A-464F-9480-83529C1B1AC8 Q33718584-DC53F7AA-1792-44F2-B759-F1E485857A9D Q33783331-9E072790-8AE9-4662-ACA7-180ADC8B8E60 Q33869731-5C01776F-0C4E-4079-BA4C-233622BE99D4 Q33896328-FD2F51EA-78BB-46B4-94F7-49293B2BBC82 Q34135131-80534EEF-F687-48B7-B927-FDABD5B8AA6A Q34340275-4B8D7767-42C3-45D6-A976-D7C378B69906 Q34605303-7113C202-3C1D-48ED-ADFF-6F0D01A37E67 Q34758012-24338F56-EF31-4B7C-9104-3DA8D782B7EC Q34975932-D9E528CB-EF83-4209-838F-CAA9F1575979 Q35037998-A4D985D8-013B-4708-B676-27DEB53113F1 Q35198803-989C6AA1-E931-4B15-AD5E-610D265A7435 Q35420037-CB706F60-858A-4B4E-894E-E70DABF648F1 Q35780004-C8B8F44B-7F88-4B1E-BF71-207C47E8C463 Q35852312-F6B75DAB-EA05-48E4-86F9-63231C10AAAE Q35858249-543215A4-78BC-4AA9-A64C-35F2329B260A Q36647511-7C946914-14EA-4A7C-A364-D0DFA356AEDA Q36742541-DE137D6D-C8BF-4F59-966B-5F97BBF5EF98 Q36774903-A814A0DE-B128-47C6-9AAA-EF53D899F299 Q37335955-B8487D88-4133-4F30-8730-658883872C00 Q37614883-ADAF58AE-7ECC-4B50-9960-17F12F5779D6 Q38329748-A2B53C2D-322A-4D25-8A65-6ABE6E90F6A1 Q38660890-F4A70E18-FD57-4314-950C-532E2763DA9F Q38871936-5F71C32F-B461-4C87-90CF-BAEBB2518C27 Q39504639-D678228F-3DDF-43C3-AD97-27503D362620 Q39541166-FBC66EF8-8CA6-43AE-9E6D-866ADC0B0517 Q39655295-10BD26A1-6B5A-4B26-B260-CD50D44C113C Q39686922-D60D3A4A-AB01-47F7-94B5-80392EFE59D1 Q39723718-C1FE42F6-CA69-4938-8B5E-FB40C5ED4E28 Q39871119-89421CC6-A292-4D0B-8074-015B788D1A8B

P2860

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

http://www.wikidata.org/entity/Q40516648

description

1990 nî lūn-bûn

@nan

1990年の論文

@ja

1990年論文

@yue

1990年論文

@zh-hant

1990年論文

@zh-hk

1990年論文

@zh-mo

1990年論文

@zh-tw

1990年论文

@wuu

1990年论文

@zh

1990年论文

@zh-cn

name

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

@en

type

label

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

@en

prefLabel

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

@en

P1433

Q40516648-BECE67CE-31AA-494A-A9D8-161ED3D1CCD8

P1476

Q40516648-050389DD-7E80-46BB-A85B-AA605E54804B

P2093

Q40516648-2F731BB6-8C6A-4676-BDE3-683D93E58789

Q40516648-701B8EBE-6B6E-4B97-ADC2-41A45F531F51

Q40516648-7465CD08-029B-460A-ABA2-B167C5DBD490

Q40516648-F38E2AC5-0E9C-4582-B0BD-CC1E8CA0EC3F

P2860

Q40516648-04F08606-FABF-4CA2-84B8-5D8EFC945495

Q40516648-076DD853-135D-417D-82E7-9D0BDD4ABDC1

Q40516648-243584AF-D3BA-4327-8B53-3B54720B7F91

Q40516648-28F4534C-DC67-4C77-B1B1-56A24D7EDA3A

Q40516648-316992A7-9FB4-450E-83D2-8B174C9FF9AB

Q40516648-33B7A29D-4EF5-4B65-864F-F9A1C5CC6D25

Q40516648-3DE27FEE-6AF8-4629-AEB0-FA30DAEC59D1

Q40516648-3DEC8C2E-2E7F-4559-9FA3-022958325FA7

Q40516648-43CA71F1-00AD-4AB1-B705-5C4CD34C88DA

Q40516648-4E2B804A-3F1A-4ED6-A0BE-410F04E57B5C

P304

Q40516648-CB50C681-B87E-411D-B587-8F0CF2B55832

P31

Q40516648-FE16B6F6-A910-4E86-BD03-1AA47EC30674

P356

Q40516648-C758ED7F-DE29-47F6-8892-B46F189CCD85

P433

Q40516648-E0F2E8E9-D41C-4FF8-A236-71F903FB087D

P478

Q40516648-8D73056F-D5C2-49F8-9143-4C0EAB9BEE97

P577

Q40516648-29924B09-B9E8-4157-8066-E9408D1E67E4

P5875

Q40516648-67DFF537-C967-4B16-9AC6-2ED77DE0AAFC

P698

Q40516648-5067D752-1AAA-44F7-B12F-829EF672B64B

P932

Q40516648-9FE30E46-A0A8-472F-867D-0CA0E565A761

P356

P1433

Nucleic Acids Research

P1476

Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

@en

P2093

Abrahams JP

http://www.w3.org/2001/XMLSchema#string

Pleij C

http://www.w3.org/2001/XMLSchema#string

van Batenburg E

http://www.w3.org/2001/XMLSchema#string

van den Berg M

http://www.w3.org/2001/XMLSchema#string

P2860

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

A new principle of RNA folding based on pseudoknotting

On finding all suboptimal foldings of an RNA molecule

Improved estimation of secondary structure in ribonucleic acids

Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review.

Secondary structure of the Tetrahymena ribosomal RNA intervening sequence: structural homology with fungal mitochondrial intervening sequences

The tRNA-like structure of turnip yellow mosaic virus RNA: structural organization of the last 159 nucleotides from the 3' OH terminus.

Improved predictions of secondary structures for RNA

Potential secondary and tertiary structure in the genomic RNA of foot and mouth disease virus.

Some simple computational methods to improve the folding of large RNAs.

P304

3035-3044

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1093/NAR/18.10.3035

http://www.w3.org/2001/XMLSchema#string

P433

10

http://www.w3.org/2001/XMLSchema#string

P478

18

http://www.w3.org/2001/XMLSchema#string

P577

1990-05-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

21463196

http://www.w3.org/2001/XMLSchema#string

P698

1693421

http://www.w3.org/2001/XMLSchema#string

P932

330835

http://www.w3.org/2001/XMLSchema#string