SeqTar: an effective method for identifying microRNA guided cleavage sites from degradome of polyadenylated transcripts in plants.
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New technologies for 21st century plant scienceFinding microRNA targets in plants: current status and perspectivessPARTA: a parallelized pipeline for integrated analysis of plant miRNA and cleaved mRNA data sets, including new miRNA target-identification softwareBeyond cleaved small RNA targets: unraveling the complexity of plant RNA degradome data.Comprehensive analysis of small RNA-seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction in Arabidopsis thaliana.Genome-wide analysis reveals dynamic changes in expression of microRNAs during vascular cambium development in Chinese fir, Cunninghamia lanceolata.Genome-wide identification of Brassica napus microRNAs and their targets in response to cadmiumStarScan: a web server for scanning small RNA targets from degradome sequencing dataCharacterization and expression patterns of microRNAs involved in rice grain filling.Determinants beyond both complementarity and cleavage govern microR159 efficacy in ArabidopsisDifferentially expressed microRNA cohorts in seed development may contribute to poor grain filling of inferior spikelets in rice.Genome-wide discovery and analysis of phased small interfering RNAs in Chinese sacred lotus.Evolutionary Comparison of Two Combinatorial Regulators of SBP-Box Genes, MiR156 and MiR529, in PlantsIdentification of novel miRNAs from drought tolerant rice variety Nagina 22.The use of high-throughput sequencing methods for plant microRNA research.Identification of microRNAs in Response to Drought in Common Wild Rice (Oryza rufipogon Griff.) Shoots and Roots.Identification of new microRNA-regulated genes by conserved targeting in plant speciesPost-transcriptional modulation of protein phosphatase PPP2CA and tumor suppressor PTEN by endogenous siRNA cleaved from hairpin within PTEN mRNA 3'UTR in human liver cells.Endogenous Small-Noncoding RNAs and Potential Functions in Desiccation Tolerance in Physcomitrella PatensGlobal Analysis of Truncated RNA Ends Reveals New Insights into Ribosome Stalling in Plants.Genome-wide identification and in silico characterisation of microRNAs, their targets and processing pathway genes in Phaseolus vulgaris L.Small RNA profiles from Panax notoginseng roots differing in sizes reveal correlation between miR156 abundances and root biomass levels.PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencingBioCreative-IV virtual issue.Redox signaling mediates the expression of a sulfate-deprivation-inducible microRNA395 in Arabidopsis.A naïve Bayesian classifier for identifying plant microRNAs.MTide: an integrated tool for the identification of miRNA-target interaction in plants.A multi-omics study of the grapevine-downy mildew (Plasmopara viticola) pathosystem unveils a complex protein coding- and noncoding-based arms race during infection.Transcriptome and Degradome Sequencing Reveals Dormancy Mechanisms of Cunninghamia lanceolata Seeds.Phased secondary small interfering RNAs in Panaxnotoginseng.Computational tools for plant small RNA detection and categorization.Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypium spp.).Widespread long noncoding RNAs as endogenous target mimics for microRNAs in plants.A highly specific microRNA-mediated mechanism silences LTR retrotransposons of strawberry.Genome-wide identification and comprehensive analysis of microRNAs and phased small interfering RNAs in watermelon.A comprehensive review of web-based resources of non-coding RNAs for plant science research.New insights into tomato microRNAs
P2860
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P2860
SeqTar: an effective method for identifying microRNA guided cleavage sites from degradome of polyadenylated transcripts in plants.
description
2011 nî lūn-bûn
@nan
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
2011年论文
@zh
2011年论文
@zh-cn
name
SeqTar: an effective method fo ...... nylated transcripts in plants.
@en
type
label
SeqTar: an effective method fo ...... nylated transcripts in plants.
@en
prefLabel
SeqTar: an effective method fo ...... nylated transcripts in plants.
@en
P2093
P2860
P356
P1476
SeqTar: an effective method fo ...... nylated transcripts in plants.
@en
P2093
Ramanjulu Sunkar
Weixiong Zhang
Yong-Fang Li
P2860
P356
10.1093/NAR/GKR1092
P50
P577
2011-12-02T00:00:00Z