Physical tethering and volume exclusion determine higher-order genome organization in budding yeast - Wikidata - awgldk - TriplyDB

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast

http://www.wikidata.org/entity/Q42236154

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A simple biophysical model emulates budding yeast chromosome condensation Spatial Genome Organization and Its Emerging Role as a Potential Diagnosis Tool Analysis methods for studying the 3D architecture of the genome Uncertainty in integrative structural modeling High resolution imaging reveals heterogeneity in chromatin states between cells that is not inherited through cell division.Entropy gives rise to topologically associating domains.Spatial reorganization of telomeres in long-lived quiescent cells.On the demultiplexing of chromosome capture conformation data The statistical-mechanics of chromosome conformation capture Neocentromeres Provide Chromosome Segregation Accuracy and Centromere Clustering to Multiple Loci along a Candida albicans Chromosome Systematic characterization of the conformation and dynamics of budding yeast chromosome XII.High-quality genome (re)assembly using chromosomal contact data.Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization.Restraint-based three-dimensional modeling of genomes and genomic domains.Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression Reproducibility of 3D chromatin configuration reconstructions The dynamic three-dimensional organization of the diploid yeast genome.Spatial confinement is a major determinant of the folding landscape of human chromosomes.Mechanisms and principles of homology search during recombination.Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data.Normalization of a chromosomal contact map.A statistical approach for inferring the 3D structure of the genome.The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?Chromosome conformation maps in fission yeast reveal cell cycle dependent sub nuclear structure.A diffusion model for the coordination of DNA replication in Schizosaccharomyces pombe.The 3D organization of the yeast genome correlates with co-expression and reflects functional relations between genes.Colocalization of coregulated genes: a steered molecular dynamics study of human chromosome 19.A sequence-specific interaction between the Saccharomyces cerevisiae rRNA gene repeats and a locus encoding an RNA polymerase I subunit affects ribosomal DNA stability DNA binding by FOXP3 domain-swapped dimer suggests mechanisms of long-range chromosomal interactions.Effect of chromosome tethering on nuclear organization in yeast.Inferential modeling of 3D chromatin structure Comparative 3D genome structure analysis of the fission and the budding yeast.Improving 3D Genome Reconstructions Using Orthologous and Functional Constraints.Cohesin-dependent globules and heterochromatin shape 3D genome architecture in S. pombe.Reconstruction of 3D genome architecture via a two-stage algorithm.Global reorganization of budding yeast chromosome conformation in different physiological conditions Chromosome domain architecture and dynamic organization of the fission yeast genome.Quantified effects of chromosome-nuclear envelope attachments on 3D organization of chromosomes Predictive model of 3D domain formation via CTCF-mediated extrusion The Conformation of Yeast Chromosome III Is Mating Type Dependent and Controlled by the Recombination Enhancer.

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P2860

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast

http://www.wikidata.org/entity/Q42236154

description

2012 nî lūn-bûn

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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2012年论文

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2012年论文

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name

Physical tethering and volume ...... organization in budding yeast

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Physical tethering and volume ...... organization in budding yeast

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type

label

Physical tethering and volume ...... organization in budding yeast

@en

Physical tethering and volume ...... organization in budding yeast

@nl

prefLabel

Physical tethering and volume ...... organization in budding yeast

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Physical tethering and volume ...... organization in budding yeast

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Genome Research

P1476

Physical tethering and volume ...... organization in budding yeast

@en

P2093

Frank Alber

http://www.w3.org/2001/XMLSchema#string

Harianto Tjong

http://www.w3.org/2001/XMLSchema#string

Ke Gong

http://www.w3.org/2001/XMLSchema#string

Lin Chen

http://www.w3.org/2001/XMLSchema#string

P2860

Putting the pieces together: integrative modeling platform software for structure determination of macromolecular assemblies

Diffusion-driven looping provides a consistent framework for chromatin organization

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

Role for perinuclear chromosome tethering in maintenance of genome stability.

Ribosome biogenesis factors bind a nuclear envelope SUN domain protein to cluster yeast telomeres.

SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope.

The molecular architecture of the nuclear pore complex.

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

Capturing chromosome conformation

Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

P304

1295-1305

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scholarly article

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10.1101/GR.129437.111

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7

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22

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2012-05-22T00:00:00Z

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225042184

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22619363

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3396370

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