about
Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases.Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAsFANTOM5 transcriptome catalog of cellular states based on Semantic MediaWikiThe regulated retrotransposon transcriptome of mammalian cellsGenome-wide analysis of mammalian promoter architecture and evolutionA simple metric of promoter architecture robustly predicts expression breadth of human genes suggesting that most transcription factors are positive regulatorsExploration of the cell-cycle genes found within the RIKEN FANTOM2 data set.Systematic characterization of the zinc-finger-containing proteins in the mouse transcriptome.Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selectionMapping Mammalian Cell-type-specific Transcriptional Regulatory Networks Using KD-CAGE and ChIP-seq Data in the TC-YIK Cell Line.Chromatin states reveal functional associations for globally defined transcription start sites in four human cell lines.Pseudo-messenger RNA: phantoms of the transcriptomeThe abundance of short proteins in the mammalian proteome.14-3-3 acts as an intramolecular bridge to regulate cdc25B localization and activity.MiR-107 and MiR-185 can induce cell cycle arrest in human non small cell lung cancer cell lines.Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions.Unamplified cap analysis of gene expression on a single-molecule sequencer.Mesencephalic dopaminergic neurons express a repertoire of olfactory receptors and respond to odorant-like molecules.A promoter-level mammalian expression atlasAn atlas of human long non-coding RNAs with accurate 5' ends.Effects of cytosine methylation on transcription factor binding sitesCAGExploreR: an R package for the analysis and visualization of promoter dynamics across multiple experiments.CAGE-defined promoter regions of the genes implicated in Rett Syndrome.Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics.Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease.CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors.Annotating non-coding transcription using functional genomics strategies.The enhancer and promoter landscape of human regulatory and conventional T-cell subpopulations.Novel genes regulated by Sonic Hedgehog in pluripotent mesenchymal cells.The FANTOM5 collection, a data series underpinning mammalian transcriptome atlases in diverse cell types.FANTOM5 CAGE profiles of human and mouse samplesAn integrated expression atlas of miRNAs and their promoters in human and mouse.Reinforcing the association between distal 1q CNVs and structural brain disorder: A case of a complex 1q43-q44 CNV and a review of the literature.DeepCAGE transcriptomics identify HOXD10 as a transcription factor regulating lymphatic endothelial responses to VEGF-C.New era in genetics of early-onset muscle disease: Breakthroughs and challenges.Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.CAGEd-oPOSSUM: motif enrichment analysis from CAGE-derived TSSs.Technical Advance: Transcription factor, promoter, and enhancer utilization in human myeloid cells.A novel corepressor, BCoR-L1, represses transcription through an interaction with CtBP.Pax9 and Jagged1 act downstream of Gli3 in vertebrate limb development.
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description
researcher
@en
wetenschapper
@nl
հետազոտող
@hy
name
Alistair Forrest
@ast
Alistair Forrest
@en
Alistair Forrest
@es
Alistair Forrest
@nl
type
label
Alistair Forrest
@ast
Alistair Forrest
@en
Alistair Forrest
@es
Alistair Forrest
@nl
prefLabel
Alistair Forrest
@ast
Alistair Forrest
@en
Alistair Forrest
@es
Alistair Forrest
@nl
P1153
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P1153
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7202936901
P21
P2456
P2798
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P496
0000-0003-4543-1675