The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome
about
What does our genome encode?An integrated encyclopedia of DNA elements in the human genomeH3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regionsAccurate inference of transcription factor binding from DNA sequence and chromatin accessibility dataCTCF: master weaver of the genomeCHD7 cooperates with PBAF to control multipotent neural crest formationPredicting nucleosome positions on the DNA: combining intrinsic sequence preferences and remodeler activitiesGlobal analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domainsLinking genome to epigenomeEpigenetics, chromatin and genome organization: recent advances from the ENCODE projectGenome-wide studies of CCCTC-binding factor (CTCF) and cohesin provide insight into chromatin structure and regulationGenome-wide nucleosome positioning during embryonic stem cell developmentFast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIXNucleosome Positioning with Set of Key Positions and Nucleosome AffinityGenome-wide nucleosome map and cytosine methylation levels of an ancient human genomeAcetylation of vertebrate H2A.Z and its effect on the structure of the nucleosome.Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates.Comprehensive identification and annotation of cell type-specific and ubiquitous CTCF-binding sites in the human genome.Learning a weighted sequence model of the nucleosome core and linker yields more accurate predictions in Saccharomyces cerevisiae and Homo sapiens.Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq.BEAF regulates cell-cycle genes through the controlled deposition of H3K9 methylation marks into its conserved dual-core binding sites.The evolutionary differentiation of two histone H2A.Z variants in chordates (H2A.Z-1 and H2A.Z-2) is mediated by a stepwise mutation process that affects three amino acid residues.Discovery and annotation of functional chromatin signatures in the human genomeHigh nucleosome occupancy is encoded at human regulatory sequences.Genome-wide views of chromatin structureModulation of chromatin boundary activities by nucleosome-remodeling activities in Drosophila melanogaster.Genome-wide nucleosome positioning is orchestrated by genomic regions associated with DNase I hypersensitivity in rice.Prediction of nucleosome positioning based on transcription factor binding sitesNucleosome positioning: how is it established, and why does it matter?Predicting transcription factor binding motifs from DNA-binding domains, chromatin accessibility and gene expression data.Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomesThe effect of micrococcal nuclease digestion on nucleosome positioning data.Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin levelIdentification of the elementary structural units of the DNA damage response.Nucleosome organization in the vicinity of transcription factor binding sites in the human genome.Analysis of neonatal brain lacking ATRX or MeCP2 reveals changes in nucleosome density, CTCF binding and chromatin loopingCoordination of KSHV latent and lytic gene control by CTCF-cohesin mediated chromosome conformation.Active promoters and insulators are marked by the centrosomal protein 190.CTCF shapes chromatin by multiple mechanisms: the impact of 20 years of CTCF research on understanding the workings of chromatin.Determinants of nucleosome organization in primary human cells.
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P2860
The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome
description
2008 nî lūn-bûn
@nan
2008 թուականին հրատարակուած գիտական յօդուած
@hyw
2008 թվականին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
The insulator binding protein ...... sites across the human genome
@ast
The insulator binding protein ...... sites across the human genome
@en
The insulator binding protein ...... sites across the human genome
@en-gb
The insulator binding protein ...... sites across the human genome
@nl
type
label
The insulator binding protein ...... sites across the human genome
@ast
The insulator binding protein ...... sites across the human genome
@en
The insulator binding protein ...... sites across the human genome
@en-gb
The insulator binding protein ...... sites across the human genome
@nl
altLabel
The Insulator Binding Protein ...... Sites across the Human Genome
@en
prefLabel
The insulator binding protein ...... sites across the human genome
@ast
The insulator binding protein ...... sites across the human genome
@en
The insulator binding protein ...... sites across the human genome
@en-gb
The insulator binding protein ...... sites across the human genome
@nl
P2093
P2860
P3181
P1433
P1476
The insulator binding protein ...... sites across the human genome
@en
P2093
Craig L Peterson
Manisha Sinha
Zhiping Weng
P2860
P304
P3181
P356
10.1371/JOURNAL.PGEN.1000138
P407
P577
2008-01-01T00:00:00Z