enoLOGOS: a versatile web tool for energy normalized sequence logos - Wikidata - wikimedia - TriplyDB

enoLOGOS: a versatile web tool for energy normalized sequence logos

enoLOGOS: a versatile web tool for energy normalized sequence logos

http://www.wikidata.org/entity/Q24812886

about

Peroxisomal lactate dehydrogenase is generated by translational readthrough in mammals YeTFaSCo: a database of evaluated yeast transcription factor sequence specificities FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome UniPROBE: an online database of protein binding microarray data on protein-DNA interactions Combining SELEX with quantitative assays to rapidly obtain accurate models of protein-DNA interactions.Specific DNA-binding by apicomplexan AP2 transcription factors Signaling, Regulation, and Specificity of the Type II p21-activated Kinases The significant other: splicing by the minor spliceosome Analysis of Jak2 catalytic function by peptide microarrays: the role of the JH2 domain and V617F mutation Probing the informational and regulatory plasticity of a transcription factor DNA-binding domain Targeting the DNA-binding activity of the human ERG transcription factor using new heterocyclic dithiophene diamidines Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite RNAcontext: a new method for learning the sequence and structure binding preferences of RNA-binding proteins.Incorporating background frequency improves entropy-based residue conservation measures RNALogo: a new approach to display structural RNA alignment.Adaptive evolution in zinc finger transcription factors.Functional annotation of novel lineage-specific genes using co-expression and promoter analysis A sequence motif enriched in regions bound by the Drosophila dosage compensation complex.Comparative analyses of time-course gene expression profiles of the long-lived sch9Delta mutant.Creating PWMs of transcription factors using 3D structure-based computation of protein-DNA free binding energies.MicroRNAome of porcine pre- and postnatal development.Tinkering evolution of post-transcriptional RNA regulons: puf3p in fungi as an example.Robust target gene discovery through transcriptome perturbations and genome-wide enhancer predictions in Drosophila uncovers a regulatory basis for sensory specification.Advancing the functional utility of PAR-CLIP by quantifying background binding to mRNAs and lncRNAs Whole-genome analysis reveals that active heat shock factor binding sites are mostly associated with non-heat shock genes in Drosophila melanogaster.In silico analysis of 3'-end-processing signals in Aspergillus oryzae using expressed sequence tags and genomic sequencing data A cascade of DNA-binding proteins for sexual commitment and development in Plasmodium.Functional pathway mapping analysis for hypoxia-inducible factors.Mechanistic heterogeneity in site recognition by the structurally homologous DNA-binding domains of the ETS family transcription factors Ets-1 and PU.1.Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo Assessing the effects of symmetry on motif discovery and modeling.TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions Quantitative phosphoproteomic analysis reveals cAMP/vasopressin-dependent signaling pathways in native renal thick ascending limb cells.Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights.Absence of a simple code: how transcription factors read the genome Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor.Zinc finger binding motifs do not explain recombination rate variation within or between species of Drosophila.Deciphering the transcriptional-regulatory network of flocculation in Schizosaccharomyces pombe.What are DNA sequence motifs?

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P2860

enoLOGOS: a versatile web tool for energy normalized sequence logos

http://www.wikidata.org/entity/Q24812886

description

2005 nî lūn-bûn

@nan

2005 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2005 թվականի հուլիսին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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name

enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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enoLOGOS: a versatile web tool for energy normalized sequence logos

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P1433

Nucleic Acids Research

P1476

enoLOGOS: a versatile web tool for energy normalized sequence logos

@en

P2093

Gary D Stormo

http://www.w3.org/2001/XMLSchema#string

Trey Ideker

http://www.w3.org/2001/XMLSchema#string

Yutong Yin

http://www.w3.org/2001/XMLSchema#string

P2860

Sequence logos: a new way to display consensus sequences

The Pfam protein families database

Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A

DNA binding sites: representation and discovery

Information content of binding sites on nucleotide sequences

Analysis of the sequence-specific interactions between Cro repressor and operator DNA by systematic base substitution experiments.

Non-independence of Mnt repressor-operator interaction determined by a new quantitative multiple fluorescence relative affinity (QuMFRA) assay.

Design of polyzinc finger peptides with structured linkers.

Additivity in protein-DNA interactions: how good an approximation is it?

Quantifying DNA-protein interactions by double-stranded DNA arrays.

P304

W389-92

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scholarly article

P356

10.1093/NAR/GKI439

http://www.w3.org/2001/XMLSchema#string

P407

P433

Web Server issue

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P478

33

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P50

David L Corcoran

Panayiotis V Benos

Christopher T. Workman

P577

2005-07-01T00:00:00Z

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P5875

7762365

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P698

15980495

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1160200

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