Computational sidechain placement and protein mutagenesis with implicit solvent models.
about
Design and application of implicit solvent models in biomolecular simulationsComputational protein design: the Proteus software and selected applications.Computational protein design: validation and possible relevance as a tool for homology searching and fold recognitionTesting the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design.PROTDES: CHARMM toolbox for computational protein design.Template-based protein modeling: recent methodological advances.Equilibrium and folding simulations of NS4B H2 in pure water and water/2,2,2-trifluoroethanol mixed solvent: examination of solvation models.Protein side chain conformation predictions with an MMGBSA energy function.Recent advances in implicit solvent-based methods for biomolecular simulationsOPUS-Rota: a fast and accurate method for side-chain modeling.NMR resonance assignments of sparsely labeled proteins: amide proton exchange correlations in native and denatured states.Introducing Charge Hydration Asymmetry into the Generalized Born Model.Redesigning the stereospecificity of tyrosyl-tRNA synthetase.A Simple PB/LIE Free Energy Function Accurately Predicts the Peptide Binding Specificity of the Tiam1 PDZ DomainImplicit Solvent Model for Million-Atom Atomistic Simulations: Insights into the Organization of 30-nm Chromatin Fiber.Simple models for nonpolar solvation: Parameterization and testing.Comparing pairwise-additive and many-body generalized Born models for acid/base calculations and protein design.Comparing three stochastic search algorithms for computational protein design: Monte Carlo, replica exchange Monte Carlo, and a multistart, steepest-descent heuristic.Pairwise decomposition of an MMGBSA energy function for computational protein design.Monte Carlo simulations of proteins at constant pH with generalized Born solvent, flexible sidechains, and an effective dielectric boundary.Computational protein design with a generalized Born solvent model: application to Asparaginyl-tRNA synthetase.Protein:Ligand binding free energies: A stringent test for computational protein design
P2860
Q26866327-C71CB495-6E69-4236-BF78-6E744F81F5ADQ30009563-F5C3672B-2FD4-495E-97C4-92BD1BDAB432Q30156860-A9978ABA-539E-4C9C-BFB9-AC61391A05A3Q30368473-ABBA1ADA-13AB-4EFD-8193-CF9D303AA2BCQ30378590-839CA7EF-A376-48A0-8AB9-402A8A4C9CB1Q30382761-47775E0D-8E6C-42C3-B620-3169E4078FB8Q34801749-82164465-FBC2-4D8E-B3BD-873BDDADD5D2Q35947259-69668587-7ED7-4569-A4C7-21FA7EE3B531Q36662616-091FDC7B-1D15-4148-BF25-AD7DAD58486FQ36851694-ADE7663A-EDBA-49AA-9C0C-483C781643FEQ37235098-DAD36084-D43B-4EAF-8B07-B15BE3CB67E3Q38732734-DDCC9DFE-126B-4078-B6D8-99CE106B96F1Q38931111-3C04911F-8C30-46BA-B0E0-957CD41A6CC6Q42121367-34A4E19A-45AB-4BE2-AE18-ACF896A7B749Q42380595-02FD1845-C096-4D45-85E7-781133605917Q47735190-3CED1977-58EE-49C3-9446-0FDB81815B4FQ48021670-4874F5FB-E57C-4E4F-AFA5-590EBB5153AFQ50642617-61B31468-7B39-41E6-BE95-BE040B1B0A35Q51733078-8BBD47D5-8752-4A8A-885A-D57D4F9A1699Q51777312-513C18BA-512A-40FF-ACD6-F40B6C77D1A4Q52610954-A6564343-4502-4EA3-A178-9DF755AED2B1Q57077659-A2550213-9949-467F-8919-EFE3EB2DE742
P2860
Computational sidechain placement and protein mutagenesis with implicit solvent models.
description
2007 nî lūn-bûn
@nan
2007 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2007 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@ast
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@en
type
label
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@ast
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@en
prefLabel
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@ast
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@en
P2093
P356
P1433
P1476
Computational sidechain placement and protein mutagenesis with implicit solvent models.
@en
P2093
Alexey Alexandrov
Anne Lopes
Christine Bathelt
Georgios Archontis
P304
P356
10.1002/PROT.21379
P407
P577
2007-06-01T00:00:00Z