Single-molecule force spectroscopy of the add adenine riboswitch relates folding to regulatory mechanism
about
Diverse metastable structures formed by small oligomers of α-synuclein probed by force spectroscopyThe impact of a ligand binding on strand migration in the SAM-I riboswitchMetabolite recognition principles and molecular mechanisms underlying riboswitch functionSingle transcriptional and translational preQ1 riboswitches adopt similar pre-folded ensembles that follow distinct folding pathways into the same ligand-bound structureThe purine riboswitch as a model system for exploring RNA biology and chemistryDirect observation of multiple misfolding pathways in a single prion protein moleculeFrom mechanical folding trajectories to intrinsic energy landscapes of biopolymers.Kissing loop interaction in adenine riboswitch: insights from umbrella sampling simulationsNanomanipulation of single RNA molecules by optical tweezers.Allosteric tertiary interactions preorganize the c-di-GMP riboswitch and accelerate ligand binding.Biophysical Approaches to Bacterial Gene Regulation by Riboswitches.Reconstructing folding energy landscapes by single-molecule force spectroscopy.Energy landscape analysis of native folding of the prion protein yields the diffusion constant, transition path time, and ratesProgrammed -1 frameshifting efficiency correlates with RNA pseudoknot conformational plasticity, not resistance to mechanical unfoldingReal-time crystallographic studies of the adenine riboswitch using an X-ray free-electron laser.RNA under tension: Folding Landscapes, Kinetic partitioning Mechanism, and Molecular TensegrityApproach to the unfolding and folding dynamics of add A-riboswitch upon adenine dissociation using a coarse-grained elastic network model.Structure and mechanism of purine-binding riboswitches.A transformation for the mechanical fingerprints of complex biomolecular interactions.Kinetics of allosteric transitions in S-adenosylmethionine riboswitch are accurately predicted from the folding landscape.Single-molecule studies of riboswitch folding.Sequence-dependent folding landscapes of adenine riboswitch aptamers.Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch.Nanopore force spectroscopy of aptamer-ligand complexes.Loop-loop interaction in an adenine-sensing riboswitch: a molecular dynamics studyDecoding the mechanical fingerprints of biomolecules.Single-molecule analysis reveals multi-state folding of a guanine riboswitch.An integrated perspective on RNA aptamer ligand-recognition models: clearing muddy waters.Co-Transcriptional Folding and Regulation Mechanisms of Riboswitches.Single-molecule chemical denaturation of riboswitches.Using simulations and kinetic network models to reveal the dynamics and functions of riboswitchesConformational dynamics of the frameshift stimulatory structure in HIV-1.Ultraviolet shadowing of RNA can cause significant chemical damage in seconds.RNA Structural Modules Control the Rate and Pathway of RNA Folding and Assembly.Combining temperature and force to study folding of an RNA hairpin.Single-molecule FRET reveals the energy landscape of the full-length SAM-I riboswitch.Comprehensive profiling of the ligand binding landscapes of duplexed aptamer families reveals widespread induced fit.Allosteric mechanism of the V. vulnificus adenine riboswitch resolved by four-dimensional chemical mapping.RNA folding pathways and kinetics using 2D energy landscapes.Probing Position-Dependent Diffusion in Folding Reactions Using Single-Molecule Force Spectroscopy.
P2860
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P2860
Single-molecule force spectroscopy of the add adenine riboswitch relates folding to regulatory mechanism
description
2011 nî lūn-bûn
@nan
2011 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Single-molecule force spectros ...... olding to regulatory mechanism
@ast
Single-molecule force spectros ...... olding to regulatory mechanism
@en
type
label
Single-molecule force spectros ...... olding to regulatory mechanism
@ast
Single-molecule force spectros ...... olding to regulatory mechanism
@en
prefLabel
Single-molecule force spectros ...... olding to regulatory mechanism
@ast
Single-molecule force spectros ...... olding to regulatory mechanism
@en
P2093
P2860
P356
P1476
Single-molecule force spectros ...... olding to regulatory mechanism
@en
P2093
Daniel A N Foster
Krishna Neupane
Michael T Woodside
P2860
P304
P356
10.1093/NAR/GKR305
P407
P50
P577
2011-06-08T00:00:00Z