MiTCR: software for T-cell receptor sequencing data analysis.
about
High-Throughput Sequencing-Based Immune Repertoire Study during Infectious DiseaseVDJML: a file format with tools for capturing the results of inferring immune receptor rearrangementsImmune DNA signature of T-cell infiltration in breast tumor exomes.tcR: an R package for T cell receptor repertoire advanced data analysis.LymAnalyzer: a tool for comprehensive analysis of next generation sequencing data of T cell receptors and immunoglobulins.VDJviz: a versatile browser for immunogenomics data.A Database of Human Immune Receptor Alleles Recovered from Population Sequencing Data.Cytoreductive conditioning intensity predicts clonal diversity in ADA-SCID retroviral gene therapy patients.V-J combinations of T-cell receptor predict responses to erythropoietin in end-stage renal disease patients.Detection of T cell responses to a ubiquitous cellular protein in autoimmune diseaseQuantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized micePreparing unbiased T-cell receptor and antibody cDNA libraries for the deep next generation sequencing profiling.Unifying immunology with informatics and multiscale biology.Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing.Quantitative T cell repertoire analysis by deep cDNA sequencing of T cell receptor α and β chains using next-generation sequencing (NGS)Characterizing immune repertoires by high throughput sequencing: strategies and applications.IMSEQ--a fast and error aware approach to immunogenetic sequence analysis.Engineered dendritic cells from cord blood and adult blood accelerate effector T cell immune reconstitution against HCMVImmunExplorer (IMEX): a software framework for diversity and clonality analyses of immunoglobulins and T cell receptors on the basis of IMGT/HighV-QUEST preprocessed NGS dataVDJtools: Unifying Post-analysis of T Cell Receptor Repertoires.Quantitative and qualitative characterization of expanded CD4+ T cell clones in rheumatoid arthritis patients.RTCR: a pipeline for complete and accurate recovery of T cell repertoires from high throughput sequencing data.High-resolution analysis of the human T-cell receptor repertoire.IMonitor: A Robust Pipeline for TCR and BCR Repertoire Analysis.TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequencesVidjil: A Web Platform for Analysis of High-Throughput Repertoire SequencingDCLRE1C (ARTEMIS) mutations causing phenotypes ranging from atypical severe combined immunodeficiency to mere antibody deficiency.Clonal expansion of antitumor T cells in breast cancer correlates with response to neoadjuvant chemotherapy.Loss of the Protein Tyrosine Phosphatase PTPN22 Reduces Mannan-Induced Autoimmune Arthritis in SKG Mice.Identification of shared TCR sequences from T cells in human breast cancer using emulsion RT-PCRSingle-cell TCRseq: paired recovery of entire T-cell alpha and beta chain transcripts in T-cell receptors from single-cell RNAseqMother and child T cell receptor repertoires: deep profiling study.Analysis of allelic expression patterns in clonal somatic cells by single-cell RNA-seq.Landscape of tumor-infiltrating T cell repertoire of human cancersSequence analysis of T-cell repertoires in health and disease.TCR repertoires of intratumoral T-cell subsets.Dynamics of Individual T Cell Repertoires: From Cord Blood to Centenarians.A novel signature for stratifying the molecular heterogeneity of the tissue-infiltrating T-cell receptor repertoire reflects gastric cancer prognosis.The checkpoint for agonist selection precedes conventional selection in human thymus.Defining the clonality of peripheral T cell lymphomas using RNA-seq.
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MiTCR: software for T-cell receptor sequencing data analysis.
description
2013 nî lūn-bûn
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2013年の論文
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2013年学术文章
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2013年学术文章
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2013年学术文章
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name
MiTCR: software for T-cell receptor sequencing data analysis.
@en
MiTCR: software for T-cell receptor sequencing data analysis.
@nl
type
label
MiTCR: software for T-cell receptor sequencing data analysis.
@en
MiTCR: software for T-cell receptor sequencing data analysis.
@nl
prefLabel
MiTCR: software for T-cell receptor sequencing data analysis.
@en
MiTCR: software for T-cell receptor sequencing data analysis.
@nl
P2093
P2860
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MiTCR: software for T-cell receptor sequencing data analysis
@en
P2093
Ilgar Z Mamedov
Ivan V Zvyagin
Maria A Turchaninova
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P2888
P304
P356
10.1038/NMETH.2555
P577
2013-07-28T00:00:00Z