Comparing sequences without using alignments: application to HIV/SIV subtyping
about
Towards peptide vaccines against Zika virus: Immunoinformatics combined with molecular dynamics simulations to predict antigenic epitopes of Zika viral proteinsPepComposer: computational design of peptides binding to a given protein surfaceUniCon3D: de novo protein structure prediction using united-residue conformational search via stepwise, probabilistic samplingSolenoid and non-solenoid protein recognition using stationary wavelet packet transform.Sixty-five years of the long march in protein secondary structure prediction: the final stretch?Improved protein-protein interactions prediction via weighted sparse representation model combining continuous wavelet descriptor and PseAA composition.The evolution of logic circuits for the purpose of protein contact map predictiondensityCut: an efficient and versatile topological approach for automatic clustering of biological dataontologyX: a suite of R packages for working with ontological dataPredicting the dynamics of protein abundance.Imputing gene expression to maximize platform compatibility.MS4--Multi-Scale Selector of Sequence Signatures: an alignment-free method for classification of biological sequencesValidating regulatory predictions from diverse bacteria with mutant fitness data.PICS-Ord: unlimited coding of ambiguous regions by pairwise identity and cost scores ordination.Early response index: a statistic to discover potential early stage disease biomarkers.Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation.Analysis and practical guideline of constraint-based boolean method in genetic network inference.COMET: adaptive context-based modeling for ultrafast HIV-1 subtype identification.BLAST output visualization in the new sequencing era.A methodology to assess the intrinsic discriminative ability of a distance function and its interplay with clustering algorithms for microarray data analysis.A genetic relationship between nitrogen use efficiency and seedling root traits in maize as revealed by QTL analysis.Transcriptome dynamics of the microRNA inhibition response.Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clustersPangenome and immuno-proteomics analysis of Acinetobacter baumannii strains revealed the core peptide vaccine targets.Linear filtering reveals false negatives in species interaction data.Meta-analysis of cell- specific transcriptomic data using fuzzy c-means clustering discovers versatile viral responsive genes.Software applications toward quantitative metabolic flux analysis and modeling.Draft Genome Sequences of Three Novel Clostridium Isolates from Northern IraqDNA sequence+shape kernel enables alignment-free modeling of transcription factor binding.PhosD: inferring kinase-substrate interactions based on protein domains.Fast and accurate phylogeny reconstruction using filtered spaced-word matches.Rafts, Nanoparticles and Neural DiseaseGenome-wide association analysis to identify chromosomal regions determining components of earliness in wheat.A Network of Splice Isoforms for the MouseEstimating evolutionary distances between genomic sequences from spaced-word matches.Fast alignment-free sequence comparison using spaced-word frequencies.Effective biomedical document classification for identifying publications relevant to the mouse Gene Expression Database (GXD).In silico characterization of thermostable lipases.On the consequences of aluminium stress in rye: repression of two mitochondrial malate dehydrogenase mRNAs.Genomic regions associated with the nitrogen limitation response revealed in a global wheat core collection.
P2860
Q28119724-DB76D69F-F026-4840-B3FF-97CF94B05F63Q29048212-B994A49A-13D2-4168-AAE4-84215E9BC285Q30388897-CC3121EC-08D1-43CA-B11B-2C3D5409672EQ30393390-44B55ADA-C021-4F93-ADD4-47FF49A17971Q30396966-4F0150B1-1790-4FDD-BF38-8887433F9970Q30398188-C3C95E62-8F8E-41C2-B15D-94B83A1B6DDBQ30401337-3C0BBDDE-8382-4439-963B-E5CC4F4E2039Q31092367-9D9F0C5B-9212-43D5-908D-18A4131E596FQ31153385-B38E1A57-60BD-4623-A18F-C3790C581E08Q33583189-EAF8EA09-89C8-4BCB-A01E-C1E22D11D860Q33614031-A38B1AE0-13BA-4E15-861B-729FE977EECDQ33645945-0E49CAC0-519F-4BEC-B895-437C70F80D3FQ33725059-19E8415E-2FCB-4F61-B9A2-E509DE7845BCQ33788409-488FD8F0-FFDD-4538-8A09-957CDD4EE98EQ33827677-CB47AF80-DFAD-4065-A8FA-9020053E09D9Q34089210-317ABF0D-8475-4601-BB58-CA62668246CCQ34137597-EDDDE755-03DB-4B79-BB9F-42C5363E7CD9Q34312943-AD2EF636-1511-4CFA-B319-9D8235EA6647Q34340460-12FD7F9E-8495-4B91-81FF-74B35F130FA0Q34569794-B17F0AC4-E244-4EC5-B099-EF5C4B897521Q35666800-175AFF97-C4B5-43E3-AFED-6251A5EF3E25Q35885964-8832F844-AAE3-48D8-AA08-87240D03E8F5Q36084893-C57858D3-2FFE-4A2A-8413-E518C998DDFDQ36135237-46AF356D-6F11-441B-A1BE-36724ED9DAAAQ36337754-6D6DF432-5023-4DE2-BD3C-0C95ABAAA63EQ36394312-C57FBA45-18C7-4390-AD24-AB6B8CB9975FQ38059081-0821B154-C3D1-4635-A805-FAFE1A9F5BE1Q38636720-B21D086C-C9B1-4C2D-8925-5E65D856236AQ38765570-8484827F-3463-472B-9004-DE548FB339FBQ38777121-FAC58FA1-2EEB-4AE8-8B48-D845B1750C71Q39028507-413CA916-F432-47EE-81E2-6597FF4BC1F3Q39203564-C37E122F-6702-41A1-AEB2-1D20C09ADA05Q39689352-169F5965-C0F7-4539-9176-D57ECB2A4583Q39850400-400243CD-85D1-4A6F-9F54-58885350388FQ41825722-09D36BDF-E5DB-4004-8937-1EBCE93288B3Q41900759-CD309A52-4F94-418D-B554-C72274CBC743Q42208083-624121F2-C0CC-452C-8972-2AA4C78BA0C6Q43029943-2A00C166-D792-4344-B7AC-E37B463DCD5FQ43626521-8E5F8B4D-A67E-4FB7-B57D-EB85E1232A35Q44106817-88985056-5310-473D-B3FB-5EE35EE09DAA
P2860
Comparing sequences without using alignments: application to HIV/SIV subtyping
description
2007 nî lūn-bûn
@nan
2007 թուականին հրատարակուած գիտական յօդուած
@hyw
2007 թվականին հրատարակված գիտական հոդված
@hy
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
name
Comparing sequences without using alignments: application to HIV/SIV subtyping
@ast
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en-gb
Comparing sequences without using alignments: application to HIV/SIV subtyping
@nl
type
label
Comparing sequences without using alignments: application to HIV/SIV subtyping
@ast
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en-gb
Comparing sequences without using alignments: application to HIV/SIV subtyping
@nl
prefLabel
Comparing sequences without using alignments: application to HIV/SIV subtyping
@ast
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en-gb
Comparing sequences without using alignments: application to HIV/SIV subtyping
@nl
P2093
P2860
P3181
P356
P1433
P1476
Comparing sequences without using alignments: application to HIV/SIV subtyping
@en
P2093
Alexander Grossmann
Claudine Devauchelle
Ivan Laprevotte
Laurent Debomy
Ming Zhang
P2860
P2888
P3181
P356
10.1186/1471-2105-8-1
P407
P577
2007-01-02T00:00:00Z
P5875
P6179
1027920111