The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
about
MPromDb: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-chip experimental data.EPD in its twentieth year: towards complete promoter coverage of selected model organismsDiversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genesLinking disease-associated genes to regulatory networks via promoter organizationHAGR: the Human Ageing Genomic ResourcesIntegr8 and Genome Reviews: integrated views of complete genomes and proteomesDoOP: Databases of Orthologous Promoters, collections of clusters of orthologous upstream sequences from chordates and plantsComparative promoter region analysis powered by CORGStructural properties of promoters: similarities and differences between prokaryotes and eukaryotes.Identification of regulatory targets of tissue-specific transcription factors: application to retina-specific gene regulation.A highly distinctive mechanical property found in the majority of human promoters and its transcriptional relevanceARGO: a web system for the detection of degenerate motifs and large-scale recognition of eukaryotic promotersTBP flanking sequences: asymmetry of binding, long-range effects and consensus sequences.CAGE Basic/Analysis Databases: the CAGE resource for comprehensive promoter analysis.ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variationPAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation.CleanEx: a database of heterogeneous gene expression data based on a consistent gene nomenclature.Tumor-specific usage of alternative transcription start sites in colorectal cancer identified by genome-wide exon array analysisA computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--a case study using E2F1MADAP, a flexible clustering tool for the interpretation of one-dimensional genome annotation dataAltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.The features of Drosophila core promoters revealed by statistical analysisGenic non-coding microsatellites in the rice genome: characterization, marker design and use in assessing genetic and evolutionary relationships among domesticated groups.Contrasting patterns of transposable element insertions in Drosophila heat-shock promoters.Phylogeny disambiguates the evolution of heat-shock cis-regulatory elements in DrosophilaThe Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic informationMimivirus gene promoters exhibit an unprecedented conservation among all eukaryotes.EPD and EPDnew, high-quality promoter resources in the next-generation sequencing eraTowards biological characters of interactions between transcription factors and their DNA targets in mammals.Super paramagnetic clustering of DNA sequencesThe Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis toolsCharting gene regulatory networks: strategies, challenges and perspectives.Discovery of functional gene variants associated with human longevity: opportunities and challengesPrediction of cis-regulatory elements for drug-activated transcription factors in the regulation of drug-metabolising enzymes and drug transporters.The eukaryotic promoter database in its 30th year: focus on non-vertebrate organismsHighly conserved upstream sequences for transcription factor genes and implications for the regulatory network.PromoSer: improvements to the algorithm, visualization and accessibility.Core promoter elements of eukaryotic genes have a highly distinctive mechanical property.Identification of estrogen-responsive genes using a genome-wide analysis of promoter elements for transcription factor binding sites.Nearest-neighbor non-additivity versus long-range non-additivity in TATA-box structure and its implications for TBP-binding mechanism.
P2860
Q24538621-850200E5-03B0-48D2-ACDF-5F7CB9C4655FQ24538728-255B85FE-829E-49FC-89BC-06AC60C17EF9Q24540025-FA93FE6F-46F3-481F-A5F6-CBBC41F3E01AQ24791009-72B59178-8981-41F5-A154-AA3F46F7386DQ24793263-8C1B21B3-1CA8-46C2-A197-FBEDE506F53AQ24793999-7337339E-AD88-4BAF-A726-8E32689F61BCQ24796287-0CF9FA85-6AE6-480B-87E8-4F7024931E74Q24805577-30BBEE29-E9AA-45C1-91A8-0D9EF998F4BBQ24810289-3E7CD232-3C8E-4D3B-8C96-8E5CC8DA6781Q24810590-7A17D3CA-1B44-41A1-9ECD-D1C84BDE19B4Q24811073-A212C89C-A1AC-4431-A6CD-3B593DFB848BQ24813113-3E27BF15-1A2B-40AF-B133-9C988C325599Q25257046-F71A0B6B-6E31-4A37-A0CE-5E0C91411596Q25257773-48472C30-3286-466C-A74E-22F2F60CF24FQ28290181-3B951430-DD5F-441C-9DBB-1BA27DB52295Q30483578-3C97345C-48E7-41E3-AB46-8ECB57C8A220Q30886384-51678DAE-6D80-49C4-BF0B-FC91547E1D4DQ31038932-02908C20-527E-4AED-8D0A-9790B5903A9AQ31068338-D19611ED-1200-4132-B818-AD18FC7474D2Q31113742-04B88D93-6EC8-4DDA-B9AA-29371090CC69Q33237369-901679A3-68D3-45FA-B27A-367306A7A966Q33247480-1FAD8303-80E8-48EF-AB70-6326E3495671Q33424957-4D0D1DBF-F5E9-47ED-8FA3-1EDE22548E6AQ33521283-74A4573D-8327-41EF-9BC6-CD7DF4B9481EQ33586257-E3767AF6-3258-4ACB-8C9A-2BD3146E3D63Q34027401-DF0652A2-F54C-4E4A-976B-DF78D2980B2AQ34055630-4245E588-3692-4C16-BA8C-0D7B00BE1743Q34314378-0F1088A2-D856-4CC5-97C1-9BAE3C184667Q34378219-5A99B729-ED55-496D-9EC7-9FD1DD9D93A9Q34498257-510D06D8-0C06-4E3A-A081-0D65AC2656D1Q35253696-7DE60055-90A3-49B0-905C-36A28F5C34BCQ35744439-0BC80AC9-B9CD-4DDC-948E-CDA879E89978Q35845290-FDD3E3D7-B756-427C-A297-AE9978A6EFA3Q36544912-66D1E87F-3687-4CC2-BA39-AD498C237F5BQ37556775-9FA26CB0-128C-4608-BDBC-0E66C591A295Q37693845-FC6CB428-AC96-4F36-8637-BB390D59E790Q38449659-C402759A-D5E2-4AAE-A833-BD764D7DBD11Q40404840-6DB541A3-A0A9-424E-8720-142F29AA417CQ40442658-CCE0F233-4F56-459A-9FDF-D49F7478CA5AQ41772110-3F5AB990-C926-4CB6-91B9-755AC8AE163C
P2860
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
description
2004 nî lūn-bûn
@nan
2004 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2004 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
name
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@ast
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@en
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@nl
type
label
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@ast
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@en
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@nl
prefLabel
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@ast
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@en
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@nl
P2093
P2860
P356
P1476
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension
@en
P2093
Christoph D Schmid
Mauro Delorenzi
Philipp Bucher
Rouaïda Périer
Viviane Praz
P2860
P356
10.1093/NAR/GKH122
P407
P433
Database issue
P577
2004-01-01T00:00:00Z