The 1999 Madrid City Council election, also the 1999 Madrid municipal election, was held on Sunday, 13 June 1999, to elect the 6th City Council of the municipality of Madrid. All 53 seats in the City Council were up for election. The election was held simultaneously with regional elections in thirteen autonomous communities and local elections all throughout Spain, as well as the 1999 European Parliament election. As a result, José María Álvarez del Manzano was elected as Mayor of Madrid for a third term in office.