iRefIndex: a consolidated protein interaction database with provenance - Wikidata - awgldk - TriplyDB

iRefIndex: a consolidated protein interaction database with provenance

iRefIndex: a consolidated protein interaction database with provenance

http://www.wikidata.org/entity/Q21093638

about

An efficient weighted graph strategy to identify differentiation associated genes in embryonic stem cells Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions HitPredict: a database of quality assessed protein-protein interactions in nine species DAnCER: disease-annotated chromatin epigenetics resource Popular computational methods to assess multiprotein complexes derived from label-free affinity purification and mass spectrometry (AP-MS) experiments The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies A review on computational systems biology of pathogen-host interactions Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches Exome sequencing links corticospinal motor neuron disease to common neurodegenerative disorders The BioGRID interaction database: 2015 update The BioGRID interaction database: 2013 update Reactome: a database of reactions, pathways and biological processes The BioGRID Interaction Database: 2011 update Detecting mutually exclusive interactions in protein-protein interaction maps APP Is a Context-Sensitive Regulator of the Hippocampal Presynaptic Active Zone Reactome pathway analysis to enrich biological discovery in proteomics data sets An evidence-based approach to identify aging-related genes in Caenorhabditis elegans Optimization criteria and biological process enrichment in homologous multiprotein modules Ontology-Based Querying with Bio2RDF's Linked Open Data iRefR: an R package to manipulate the iRefIndex consolidated protein interaction database Combining Chemical Profiling and Network Analysis to Investigate the Pharmacology of Complex Prescriptions in Traditional Chinese Medicine The BioGRID interaction database: 2017 update Pathway and network analysis of cancer genomes A draft map of the human proteome MINT, the molecular interaction database: 2009 update Visual analysis of transcriptome data in the context of anatomical structures and biological networks Domain-mediated protein interaction prediction: From genome to network.RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma.The impact of gene expression regulation on evolution of extracellular signaling pathways.ANAP: an integrated knowledge base for Arabidopsis protein interaction network analysis.Effects of protein interaction data integration, representation and reliability on the use of network properties for drug target prediction.A survey of protein interaction data and multigenic inherited disorders Linking proteomic and transcriptional data through the interactome and epigenome reveals a map of oncogene-induced signaling.The CRAPome: a contaminant repository for affinity purification-mass spectrometry data.Discover context-specific combinatorial transcription factor interactions by integrating diverse ChIP-Seq data sets Network analysis of GWAS data M-Finder: Uncovering functionally associated proteins from interactome data integrated with GO annotations.Identifying pathogenic processes by integrating microarray data with prior knowledge Integration of biological data by kernels on graph nodes allows prediction of new genes involved in mitotic chromosome condensation.Building a hierarchical organization of protein complexes out of protein association data.

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P2860

iRefIndex: a consolidated protein interaction database with provenance

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2008 nî lūn-bûn

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2008年の論文

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2008年論文

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1471-2105-9-405

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BMC Bioinformatics

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iRefIndex: a consolidated protein interaction database with provenance

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Ian M Donaldson

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Sabry Razick

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P2860

The Protein Data Bank

Cytoscape: a software environment for integrated models of biomolecular interaction networks

MPact: the MIPS protein interaction resource on yeast.

BioGRID: a general repository for interaction datasets

IntAct: an open source molecular interaction database

A proteome-wide protein interaction map for Campylobacter jejuni

MINT: the Molecular INTeraction database

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

The human disease network

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scholarly article

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272113

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10.1186/1471-2105-9-405

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9

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George Magklaras

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