CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria - Wikidata - awgldk - TriplyDB

CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria

CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria

http://www.wikidata.org/entity/Q23793570

about

From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF The 2014 Nucleic Acids Research Database Issue and an updated NAR online Molecular Biology Database Collection.A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data.DMINDA: an integrated web server for DNA motif identification and analyses Databases for Microbiologists G-quadruplex prediction in E. coli genome reveals a conserved putative G-quadruplex-Hairpin-Duplex switch.An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria Every Site Counts: Submitting Transcription Factor-Binding Site Information through the CollecTF Portal.Sequence-Specific Recognition of DNA by Proteins: Binding Motifs Discovered Using a Novel Statistical/Computational Analysis.Assessment of transfer methods for comparative genomics of regulatory networks in bacteria.Parametric bootstrapping for biological sequence motifs.Modelling microbial metabolic rewiring during growth in a complex medium RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond.Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database.The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response.Genome-Wide Transcriptional Start Site Mapping and sRNA Identification in the Pathogen Leptospira interrogans.The Evidence and Conclusion Ontology (ECO): Supporting GO Annotations.Mining Bacterial Genomes for Secondary Metabolite Gene Clusters.bTSSfinder: a novel tool for the prediction of promoters in cyanobacteria and Escherichia coli.Structural characterizations of metal ion binding transcriptional regulator CueR from opportunistic pathogen pseudomonas aeruginosa to identify its possible involvements in virulence.SigmoID: a user-friendly tool for improving bacterial genome annotation through analysis of transcription control signals PRODORIC2: the bacterial gene regulation database in 2018.LASAGNA-Search 2.0: integrated transcription factor binding site search and visualization in a browser.dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation.ADAGE signature analysis: differential expression analysis with data-defined gene sets.dRNA-seq implicates sulfide as master regulator of S(0) metabolism in Chlorobaculum tepidum and other green sulfur bacteria.Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria.

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CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria

http://www.wikidata.org/entity/Q23793570

description

2014 nî lūn-bûn

@nan

2014 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի հունվարին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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name

CollecTF: a database of experi ...... ctor-binding sites in Bacteria

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CollecTF: a database of experi ...... ctor-binding sites in Bacteria

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CollecTF: a database of experi ...... ctor-binding sites in Bacteria

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CollecTF: a database of experi ...... ctor-binding sites in Bacteria

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CollecTF: a database of experi ...... ctor-binding sites in Bacteria

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CollecTF: a database of experi ...... ctor-binding sites in Bacteria

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Dinara M Sagitova

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Elliot R White

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Joseph P Cornish

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Sefa Kiliç

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P2860

ORegAnno: an open-access community-driven resource for regulatory annotation

WebLogo: A Sequence Logo Generator

Dissecting the PhoP regulatory network of Escherichia coli and Salmonella enterica.

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

RegTransBase--a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes

Improved predictions of transcription factor binding sites using physicochemical features of DNA.

LASAGNA: a novel algorithm for transcription factor binding site alignment

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10.1093/NAR/GKT1123

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Database issue

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42

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2013-11-14T00:00:00Z

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