A long-range pseudoknot is required for activity of the Neurospora VS ribozyme - Wikidata - awgldk - TriplyDB

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

http://www.wikidata.org/entity/Q24562962

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Pseudoknots: RNA structures with diverse functions The Varkud satellite ribozyme Plant pathogenic RNAs and RNA catalysis Structure of the ribozyme substrate hairpin of Neurospora VS RNA: a close look at the cleavage site.NMR structure of the active conformation of the Varkud satellite ribozyme cleavage site NMR structure of the A730 loop of the Neurospora VS ribozyme: insights into the formation of the active site Structural Insights Into Substrate Recognition by the Neurospora Varkud Satellite Ribozyme: Importance of U-Turns at the Kissing-Loop Junction NMR Localization of Divalent Cations at the Active Site of the Neurospora VS Ribozyme Provides Insights into RNA–Metal-Ion Interactions Chemistry and Biology of Self-Cleaving Ribozymes Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes.The global structure of the VS ribozyme.Structure, folding and activity of the VS ribozyme: importance of the 2-3-6 helical junction Recent advances in the elucidation of the mechanisms of action of ribozymes Single VS ribozyme molecules reveal dynamic and hierarchical folding toward catalysis.Laser-assisted single-molecule refolding (LASR).Do the hairpin and VS ribozymes share a common catalytic mechanism based on general acid-base catalysis? A critical assessment of available experimental data.4-thio-U cross-linking identifies the active site of the VS ribozyme.Metal ions: supporting actors in the playbook of small ribozymes.Convergence of natural and artificial evolution on an RNA loop-loop interaction: the HIV-1 dimerization initiation site.Crystal structure of the Varkud satellite ribozyme.Structural architecture of an RNA that competitively inhibits RNase L.Evidence for proton transfer in the rate-limiting step of a fast-cleaving Varkud satellite ribozyme.Stem-Loop V of Varkud Satellite RNA Exhibits Characteristics of the Mg(2+) Bound Structure in the Presence of Monovalent Ions.Intramolecular secondary structure rearrangement by the kissing interaction of the Neurospora VS ribozyme.Retrotransposon Ty1 RNA contains a 5'-terminal long-range pseudoknot required for efficient reverse transcription.Modulating RNA structure and catalysis: lessons from small cleaving ribozymes.Nucleic acid catalysis: metals, nucleobases, and other cofactors.Insights into RNA structure and dynamics from recent NMR and X-ray studies of the Neurospora Varkud satellite ribozyme.The complete VS ribozyme in solution studied by small-angle X-ray scattering.The contribution of 2'-hydroxyls to the cleavage activity of the Neurospora VS ribozyme.Rapid formation of a solvent-inaccessible core in the Neurospora Varkud satellite ribozyme In vitro and in vivo self-cleavage of a viroid RNA with a mutation in the hammerhead catalytic pocket.Rational engineering of the Neurospora VS ribozyme to allow substrate recognition via different kissing-loop interactions.Targeting pseudoknots in H5N1 hemagglutinin using designed aptamers.The role of phosphate groups in the VS ribozyme-substrate interaction.Heuristic RNA pseudoknot prediction including intramolecular kissing hairpins.A remarkably stable kissing-loop interaction defines substrate recognition by the Neurospora Varkud Satellite ribozyme.An important role of G638 in the cis-cleavage reaction of the Neurospora VS ribozyme revealed by a novel nucleotide analog incorporation method The shape-shifting quasispecies of RNA: one sequence, many functional folds Formation of an active site in trans by interaction of two complete Varkud Satellite ribozymes.

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A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

http://www.wikidata.org/entity/Q24562962

description

1996 nî lūn-bûn

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1996 թուականի Յունիսին հրատարակուած գիտական յօդուած

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1996 թվականի հունիսին հրատարակված գիտական հոդված

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1996年の論文

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1996年論文

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1996年論文

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1996年論文

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1996年論文

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1996年論文

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1996年论文

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name

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@ast

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@en

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@nl

type

label

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@ast

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@en

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@nl

prefLabel

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@ast

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@en

A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@nl

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J.1460-2075.1996.TB00642.X

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The EMBO Journal

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A long-range pseudoknot is required for activity of the Neurospora VS ribozyme

@en

P2093

Beattie TL

http://www.w3.org/2001/XMLSchema#string

Collins RA

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Olive JE

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Rastogi T

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P2860

Efficient trans-cleavage of a stem-loop RNA substrate by a ribozyme derived from neurospora VS RNA

The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

Three-dimensional structure of a hammerhead ribozyme

Rapid and efficient site-specific mutagenesis without phenotypic selection

A site-specific self-cleavage reaction performed by a novel RNA in Neurospora mitochondria

The VS catalytic RNA replicates by reverse transcription as a satellite of a retroplasmid

RNA-mediated ligation of self-cleavage products of a Neurospora mitochondrial plasmid transcript

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review.

Chemical probes for higher-order structure in RNA.

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2820-2825

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