How do site-specific DNA-binding proteins find their targets? - Wikidata - awgldk - TriplyDB

How do site-specific DNA-binding proteins find their targets?

How do site-specific DNA-binding proteins find their targets?

http://www.wikidata.org/entity/Q24563835

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DNA cleavage and opening reactions of human topoisomerase IIα are regulated via Mg2+-mediated dynamic bending of gate-DNA Thermodynamic characterization of specific interactions between the human Lon protease and G-quartet DNA High fidelity of RecA-catalyzed recombination: a watchdog of genetic diversity DNA-tension dependence of restriction enzyme activity reveals mechanochemical properties of the reaction pathway.Simulation of non-specific protein-mRNA interactions.Saccharomyces cerevisiae Mre11 is a high-affinity G4 DNA-binding protein and a G-rich DNA-specific endonuclease: implications for replication of telomeric DNA Role of the tryptophan residue in the vicinity of the catalytic center of exonuclease III family AP endonucleases: AP site recognition mechanism.Accessing DNA damage in chromatin: Preparing the chromatin landscape for base excision repair DNA dynamics and single-molecule biology Suppression of APOBEC3-mediated restriction of HIV-1 by Vif Diffusion of myosin light chain kinase on actin: A mechanism to enhance myosin phosphorylation rates in smooth muscle.Continuous observation of the stochastic motion of an individual small-molecule walker.Retroviral intasomes search for a target DNA by 1D diffusion which rarely results in integration Subdiffusive motion of bacteriophage in mucosal surfaces increases the frequency of bacterial encounters.A Dynamic Search Process Underlies MicroRNA Targeting.Structural basis for sequence-dependent DNA cleavage by nonspecific endonucleases Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex New Insights into DNA Recognition by Zinc Fingers Revealed by Structural Analysis of the Oncoprotein ZNF217 Massively parallel measurements of molecular interaction kinetics on a microfluidic platform.Twist-open mechanism of DNA damage recognition by the Rad4/XPC nucleotide excision repair complex Human alkyladenine DNA glycosylase employs a processive search for DNA damage Molecular recognition in complexes of TRF proteins with telomeric DNA Different mutagenic potential of HIV-1 restriction factors APOBEC3G and APOBEC3F is determined by distinct single-stranded DNA scanning mechanisms TFCat: the curated catalog of mouse and human transcription factors The GCN4 bZIP targets noncognate gene regulatory sequences: quantitative investigation of binding at full and half sites.An integrated model of transcription factor diffusion shows the importance of intersegmental transfer and quaternary protein structure for target site finding.Unleashing the power of meta-threading for evolution/structure-based function inference of proteins.Identification of oligonucleotide sequences that direct the movement of the Escherichia coli FtsK translocase.Long-distance lateral diffusion of human Rad51 on double-stranded DNA.Dynamics of initiation, termination and reinitiation of DNA translocation by the motor protein EcoR124I A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.Single-molecule analysis of 1D diffusion and transcription elongation of T7 RNA polymerase along individual stretched DNA molecules.Myosin V and Kinesin act as tethers to enhance each others' processivity.XMAP215 is a processive microtubule polymerase.How DNA coiling enhances target localization by proteins Single-molecule dynamics of the DNA-EcoRII protein complexes revealed with high-speed atomic force microscopy.Caught in the act: the lifetime of synaptic intermediates during the search for homology on DNA.Type III restriction enzymes cleave DNA by long-range interaction between sites in both head-to-head and tail-to-tail inverted repeat Dynamic basis for one-dimensional DNA scanning by the mismatch repair complex Msh2-Msh6.Sequence-dependent sliding kinetics of p53

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How do site-specific DNA-binding proteins find their targets?

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2004 nî lūn-bûn

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2004 թուականին հրատարակուած գիտական յօդուած

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How do site-specific DNA-binding proteins find their targets?

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How do site-specific DNA-binding proteins find their targets?

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How do site-specific DNA-binding proteins find their targets?

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How do site-specific DNA-binding proteins find their targets?

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How do site-specific DNA-binding proteins find their targets?

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How do site-specific DNA-binding proteins find their targets?

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How do site-specific DNA-binding proteins find their targets?

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Nucleic Acids Research

P1476

How do site-specific DNA-binding proteins find their targets?

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John F Marko

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Stephen E Halford

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P2860

The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments

Crystal structure of the lactose operon repressor and its complexes with DNA and inducer

Rapid exchange of histone H1.1 on chromatin in living human cells

Dynamic binding of histone H1 to chromatin in living cells

Analysis of a one-dimensional random walk with irreversible losses at each step: applications for protein movement on DNA

Direct mechanical measurements of the elasticity of single DNA molecules by using magnetic beads

Comparison of the DNA association kinetics of the Lac repressor tetramer, its dimeric mutant LacIadi, and the native dimeric Gal repressor

The lac repressor-operator interaction. 3. Kinetic studies

Myosin V walks hand-over-hand: single fluorophore imaging with 1.5-nm localization

High mobility of proteins in the mammalian cell nucleus

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32

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