Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing - Wikidata - awgldk - TriplyDB

Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing

Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing

http://www.wikidata.org/entity/Q24601420

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Comparative genomics of koala, cattle and sheep strains of Chlamydia pecorum Trachoma and Ocular Chlamydial Infection in the Era of Genomics A C. trachomatis cloning vector and the generation of C. trachomatis strains expressing fluorescent proteins under the control of a C. trachomatis promoter Intravaginal Chlamydia trachomatis Challenge Infection Elicits TH1 and TH17 Immune Responses in Mice That Promote Pathogen Clearance and Genital Tract Damage Detecting rare gene transfer events in bacterial populations Diagnostic Procedures to Detect Chlamydia trachomatis Infections Insights from genomics into bacterial pathogen populations Genome analysis of a transmissible lineage of pseudomonas aeruginosa reveals pathoadaptive mutations and distinct evolutionary paths of hypermutators Locally Confined Clonal Complexes of Mycobacterium ulcerans in Two Buruli Ulcer Endemic Regions of Cameroon Routine use of microbial whole genome sequencing in diagnostic and public health microbiology Chlamydiaceae Genomics Reveals Interspecies Admixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans Spatiotemporal Co-existence of Two Mycobacterium ulcerans Clonal Complexes in the Offin River Valley of Ghana Beyond Tryptophan Synthase: Identification of Genes That Contribute to Chlamydia trachomatis Survival during Gamma Interferon-Induced Persistence and Reactivation Urogenital Chlamydia trachomatis strain types, defined by high-resolution multilocus sequence typing, in relation to ethnicity and urogenital symptoms among a young screening population in Amsterdam, The Netherlands.Urogenital Chlamydia trachomatis infections among ethnic groups in Paramaribo, Suriname; determinants and ethnic sexual mixing patterns.Chlamydia trachomatis Genital Infections.Transforming clinical microbiology with bacterial genome sequencing.Forward genetic approaches in Chlamydia trachomatis.Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa.Direct amplification, sequencing and profiling of Chlamydia trachomatis strains in single and mixed infection clinical samples.Genetic variation in Chlamydia trachomatis and their hosts: impact on disease severity and tissue tropism European Chlamydia abortus livestock isolate genomes reveal unusual stability and limited diversity, reflected in geographical signatures Membrane vesicle production by Chlamydia trachomatis as an adaptive response Rapid detection and strain typing of Chlamydia trachomatis using a highly multiplexed microfluidic PCR assay.Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion Plasmid CDS5 influences infectivity and virulence in a mouse model of Chlamydia trachomatis urogenital infection.No indication for tissue tropism in urogenital and anorectal Chlamydia trachomatis infections using high-resolution multilocus sequence typing.Whole-genome enrichment and sequencing of Chlamydia trachomatis directly from clinical samples Distinct transmission networks of Chlamydia trachomatis in men who have sex with men and heterosexual adults in Amsterdam, The Netherlands.Genetic transformation of a clinical (genital tract), plasmid-free isolate of Chlamydia trachomatis: engineering the plasmid as a cloning vector.Neutral genomic microevolution of a recently emerged pathogen, Salmonella enterica serovar Agona.Genomic and phenotypic characterization of in vitro-generated Chlamydia trachomatis recombinants.Culture-independent sequence analysis of Chlamydia trachomatis in urogenital specimens identifies regions of recombination and in-patient sequence mutations.Bacterial resistance to leucyl-tRNA synthetase inhibitor GSK2251052 develops during treatment of complicated urinary tract infections.In silico scrutiny of genes revealing phylogenetic congruence with clinical prevalence or tropism properties of Chlamydia trachomatis strains.Plasmid deficiency in urogenital isolates of Chlamydia trachomatis reduces infectivity and virulence in a mouse model.Identification of type III secretion substrates of Chlamydia trachomatis using Yersinia enterocolitica as a heterologous system.Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins.High Prevalence of Co-Infections by Invasive and Non-Invasive Chlamydia trachomatis Genotypes during the Lymphogranuloma Venereum Outbreak in Spain.Genomic factors related to tissue tropism in Chlamydia pneumoniae infection

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Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing

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2012 թուականի Ապրիլին հրատարակուած գիտական յօդուած

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2012 թվականի ապրիլին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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Whole-genome analysis of diver ...... ked by current clinical typing

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Whole-genome analysis of diver ...... ked by current clinical typing

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Nature Genetics

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Whole-genome analysis of diver ...... ked by current clinical typing

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Bertille de Barbeyrac

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Brian G Spratt

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Carina Bjartling

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Helena M B Seth-Smith

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Henry J C de Vries

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Kenneth Persson

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Lesley T Cutcliffe

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Maïté Clerc

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Peter Marsh

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Rachel J Skilton

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P2860

Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

PAML: a program package for phylogenetic analysis by maximum likelihood

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

Rapid pneumococcal evolution in response to clinical interventions

Analyzing the mosaic structure of genes

Interplay of recombination and selection in the genomes of Chlamydia trachomatis.

Multi locus sequence typing of Chlamydiales: clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis

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793637

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10.1038/NG.2214

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4

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44

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Julian Parkhill

Nicholas Thomson

Cécile Bébéar

Anthony W Solomon

Martin J Holland

Arjen Speksnijder

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2012-04-01T00:00:00Z

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221692652

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22406642

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Chlamydia trachomatis

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3378690

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