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NONCODE v3.0: integrative annotation of long noncoding RNAs

NONCODE v3.0: integrative annotation of long noncoding RNAs

http://www.wikidata.org/entity/Q24621531

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A computational framework to infer human disease-associated long noncoding RNAs Small RNA deep sequencing reveals a distinct miRNA signature released in exosomes from prion-infected neuronal cells Long non-coding RNA Databases in Cardiovascular Research Bioinformatics tools and novel challenges in long non-coding RNAs (lncRNAs) functional analysis Long noncoding RNAs-related diseases, cancers, and drugs Tuning the engine: an introduction to resources on post-transcriptional regulation of gene expression Biological databases for human research Long non-coding RNAs and complex human diseases Developmental programming of long non-coding RNAs during postnatal liver maturation in mice A blood based 12-miRNA signature of Alzheimer disease patients Long non-coding RNAs and their biological roles in plants Epigenetic regulation in hepatocellular carcinoma requires long noncoding RNAs High throughput profiling of the cotton bollworm Helicoverpa armigera immunotranscriptome during the fungal and bacterial infections Production of a reference transcriptome and transcriptomic database (EdwardsiellaBase) for the lined sea anemone, Edwardsiella lineata, a parasitic cnidarian NONCODEv4: exploring the world of long non-coding RNA genes CentroidAlign-Web: A Fast and Accurate Multiple Aligner for Long Non-Coding RNAs LNCipedia: a database for annotated human lncRNA transcript sequences and structures RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development.New gene models and alternative splicing in the maize pathogen Colletotrichum graminicola revealed by RNA-Seq analysis.Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study.CoRAL: predicting non-coding RNAs from small RNA-sequencing data Identification and characterization of long non-coding RNAs related to mouse embryonic brain development from available transcriptomic data.Identification and functional analysis of long non-coding RNAs in mouse cleavage stage embryonic development based on single cell transcriptome data.NONCODE 2016: an informative and valuable data source of long non-coding RNAs.2L-piRNA: A Two-Layer Ensemble Classifier for Identifying Piwi-Interacting RNAs and Their Function.A method for detecting long non-coding RNAs with tiled RNA expression microarrays.Identification of non-coding RNAs with a new composite feature in the Hybrid Random Forest Ensemble algorithm.The transcriptomes of the crucian carp complex (Carassius auratus) provide insights into the distinction between unisexual triploids and sexual diploids.On the classification of long non-coding RNAs.A novel reannotation strategy for dissecting DNA methylation patterns of human long intergenic non-coding RNAs in cancers.Comprehensive reconstruction and visualization of non-coding regulatory networks in human.Current status of long non-coding RNAs in human cancer with specific focus on colorectal cancer.LncRBase: an enriched resource for lncRNA information.Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts Databases for lncRNAs: a comparative evaluation of emerging tools lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs.De novo Assembly and Analysis of the Northern Leopard Frog Rana pipiens Transcriptome An update on LNCipedia: a database for annotated human lncRNA sequences.Transcriptomic analysis of the mussel Elliptio complanata identifies candidate stress-response genes and an abundance of novel or noncoding transcripts Potential roles of microRNAs in regulating long intergenic noncoding RNAs.

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P2860

NONCODE v3.0: integrative annotation of long noncoding RNAs

http://www.wikidata.org/entity/Q24621531

description

2012 nî lūn-bûn

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2012 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի հունվարին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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NONCODE v3.0: integrative annotation of long noncoding RNAs

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Nucleic Acids Research

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NONCODE v3.0: integrative annotation of long noncoding RNAs

@en

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Changning Liu

http://www.w3.org/2001/XMLSchema#string

Chaoyong Xie

http://www.w3.org/2001/XMLSchema#string

Dechao Bu

http://www.w3.org/2001/XMLSchema#string

Geir Skogerbø

http://www.w3.org/2001/XMLSchema#string

Guoguang Zhao

http://www.w3.org/2001/XMLSchema#string

Haitao Luo

http://www.w3.org/2001/XMLSchema#string

Haitao Zhao

http://www.w3.org/2001/XMLSchema#string

Hui Xiao

http://www.w3.org/2001/XMLSchema#string

Kuntao Yu

http://www.w3.org/2001/XMLSchema#string

Qi Liao

http://www.w3.org/2001/XMLSchema#string

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The distributed annotation system

lncRNAdb: a reference database for long noncoding RNAs

miRBase: integrating microRNA annotation and deep-sequencing data

The UCSC Genome Browser database: update 2011

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

NONCODE: an integrated knowledge database of non-coding RNAs

Discovery of a novel restriction endonuclease by genome comparison and application of a wheat-germ-based cell-free translation assay: PabI (5'-GTA/C) from the hyperthermophilic archaeon Pyrococcus abyssi.

The transcriptional landscape of the mammalian genome

Long non-coding RNAs: insights into functions

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D210-5

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scholarly article

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1256721

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10.1093/NAR/GKR1175

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P433

Database issue

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40

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P577

2012-01-01T00:00:00Z

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51847575

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22135294

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3245065

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