Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution - Wikidata - awgldk - TriplyDB

Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution

Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution

http://www.wikidata.org/entity/Q24646315

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The giant Cafeteria roenbergensis virus that infects a widespread marine phagocytic protist is a new member of the fourth domain of Life Deep RNA sequencing reveals hidden features and dynamics of early gene transcription in Paramecium bursaria chlorella virus 1 Conservation of major and minor jelly-roll capsid proteins in Polinton (Maverick) transposons suggests that they are bona fide viruses "Megavirales", a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses Giant virus with a remarkable complement of genes infects marine zooplankton Viruses with more than 1,000 genes: Mamavirus, a new Acanthamoeba polyphaga mimivirus strain, and reannotation of Mimivirus genes DNA viruses: the really big ones (giruses)Hidden evolutionary complexity of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes Two new subfamilies of DNA mismatch repair proteins (MutS) specifically abundant in the marine environment Giant Viruses of Amoebas: An Update Lateral gene exchanges shape the genomes of amoeba-resisting microorganisms Using signature genes as tools to assess environmental viral ecology and diversity Chloroviruses: not your everyday plant virus Pandoraviruses are highly derived phycodnaviruses Structure of a Baculovirus Sulfhydryl Oxidase, a Highly Divergent Member of the Erv Flavoenzyme Family The Expanding Family of Virophages Cedratvirus, a Double-Cork Structured Giant Virus, is a Distant Relative of Pithoviruses Changes in the composition of the RNA virome mark evolutionary transitions in green plants The Double-Stranded DNA Virosphere as a Modular Hierarchical Network of Gene Sharing Evolution of double-stranded DNA viruses of eukaryotes: from bacteriophages to transposons to giant viruses Origin of giant viruses from smaller DNA viruses not from a fourth domain of cellular life Evolution of divergent life history strategies in marine alphaproteobacteria Orthopoxvirus genome evolution: the role of gene loss Chlorovirus ATCV-1 is part of the human oropharyngeal virome and is associated with changes in cognitive functions in humans and mice.Giant viruses with an expanded complement of translation system components Two distinct SSB protein families in nucleo-cytoplasmic large DNA viruses."Marseilleviridae", a new family of giant viruses infecting amoebae.Evolution and Phylogeny of Large DNA Viruses, Mimiviridae and Phycodnaviridae Including Newly Characterized Heterosigma akashiwo Virus.Plant genomes enclose footprints of past infections by giant virus relatives Salmon Gill Poxvirus, the Deepest Representative of the Chordopoxvirinae.Evolution of DNA ligases of nucleo-cytoplasmic large DNA viruses of eukaryotes: a case of hidden complexity.Count: evolutionary analysis of phylogenetic profiles with parsimony and likelihood.Origin and evolution of eukaryotic large nucleo-cytoplasmic DNA viruses.MimiLook: A Phylogenetic Workflow for Detection of Gene Acquisition in Major Orthologous Groups of Megavirales Marine prasinovirus genomes show low evolutionary divergence and acquisition of protein metabolism genes by horizontal gene transfer Virus world as an evolutionary network of viruses and capsidless selfish elements.Phylogenetic and phyletic studies of informational genes in genomes highlight existence of a 4 domain of life including giant viruses Virus-host relationships of marine single-celled eukaryotes resolved from metatranscriptomics.Computational methods for Gene Orthology inference DNA-dependent RNA polymerase detects hidden giant viruses in published databanks

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Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution

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Eukaryotic large nucleo-cytopl ...... tion of viral genome evolution

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The ancient Virus World and evolution of cells

Remarkable sequence similarity between the dinoflagellate-infecting marine girus and the terrestrial pathogen African swine fever virus

Mimivirus relatives in the Sargasso sea

The COG database: an updated version includes eukaryotes

The virophage as a unique parasite of the giant mimivirus

Taxonomic distribution of large DNA viruses in the sea

Common origin of four diverse families of large eukaryotic DNA viruses

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

GeneMark.hmm: new solutions for gene finding

MUSCLE: multiple sequence alignment with high accuracy and high throughput

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