JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update - Wikidata - awgldk - TriplyDB

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

http://www.wikidata.org/entity/Q24650787

about

Asap: a framework for over-representation statistics for transcription factor binding sites Isoform diversity and regulation in peripheral and central neurons revealed through RNA-Seq On the immortality of television sets: "function" in the human genome according to the evolution-free gospel of ENCODE Genome of the human hookworm Necator americanus SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation A high-coverage genome sequence from an archaic Denisovan individual The interplay between transcription factors and microRNAs in genome-scale regulatory networks High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells TFM-Explorer: mining cis-regulatory regions in genomes Exonic remnants of whole-genome duplication reveal cis-regulatory function of coding exons Tbx20 regulates a genetic program essential to adult mouse cardiomyocyte function ConTra: a promoter alignment analysis tool for identification of transcription factor binding sites across species UniPROBE: an online database of protein binding microarray data on protein-DNA interactions JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research DNA methylation data analysis and its application to cancer research Identification and analysis of conserved cis-regulatory regions of the MEIS1 gene Direct regulation of diurnal Drd3 expression and cocaine reward by NPAS2.Intronic cis-regulatory modules mediate tissue-specific and microbial control of angptl4/fiaf transcription An expansive human regulatory lexicon encoded in transcription factor footprints ChIP-Seq identification of weakly conserved heart enhancers The transcription factor T-box 3 regulates colony-stimulating factor 1-dependent Jun dimerization protein 2 expression and plays an important role in osteoclastogenesis CpG islands and the regulation of transcription Azacytidine and decitabine induce gene-specific and non-random DNA demethylation in human cancer cell lines A regulatory network controls nephrocan expression and midgut patterning Deciphering the Sox-Oct partner code by quantitative cooperativity measurements Gateways to the FANTOM5 promoter level mammalian expression atlas Conservation of transcription factor binding specificities across 600 million years of bilateria evolution Core and region-enriched networks of behaviorally regulated genes and the singing genome Mammalian-wide interspersed repeat (MIR)-derived enhancers and the regulation of human gene expression Explaining the correlations among properties of mammalian promoters SwissRegulon, a database of genome-wide annotations of regulatory sites: recent updates Genome-wide tissue-specific occupancy of the Hox protein Ultrabithorax and Hox cofactor Homothorax in Drosophila Co-motif discovery identifies an Esrrb-Sox2-DNA ternary complex as a mediator of transcriptional differences between mouse embryonic and epiblast stem cells Annotation of functional variation in personal genomes using RegulomeDB A biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding data Multiple independent analyses reveal only transcription factors as an enriched functional class associated with microRNAs Associations between intronic non-B DNA structures and exon skipping Condition-specific target prediction from motifs and expression.Functional and phylogenetic characterization of proteins detected in various nematode intestinal compartments.

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P2860

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

http://www.wikidata.org/entity/Q24650787

description

2008 nî lūn-bûn

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2008 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2008 թվականի հունվարին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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name

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JASPAR, the open access databa ...... t and tools in the 2008 update

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JASPAR, the open access databa ...... t and tools in the 2008 update

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes

EPD in its twentieth year: towards complete promoter coverage of selected model organisms

Entrez Gene: gene-centered information at NCBI

Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites

Identification of conserved regulatory elements by comparative genome analysis

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes.

TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis.

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

The transcriptional landscape of the mammalian genome

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10.1093/NAR/GKM955

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Database issue

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Troels Marstrand

Man-Hung Eric Tang

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