The free energy landscape of small peptides as obtained from metadynamics with umbrella sampling corrections
about
Extended Phase-Space Methods for Enhanced Sampling in Molecular Simulations: A ReviewApproaching a parameter-free metadynamicsA dynamic structural model of expanded RNA CAG repeats: a refined X-ray structure and computational investigations using molecular dynamics and umbrella sampling simulations.Molecular dynamics of the proline switch and its role in Crk signaling.A Combined Metadynamics and Umbrella Sampling Method for the Calculation of Ion Permeation Free Energy ProfilesInsight into the folding inhibition of the HIV-1 protease by a small peptideA New Maximum Likelihood Approach for Free Energy Profile Construction from Molecular Simulations.Reaction path ensemble of the B-Z-DNA transition: a comprehensive atomistic study.Determination of free energy profiles by repository based adaptive umbrella sampling: bridging nonequilibrium and quasiequilibrium simulationsConformations and free energy landscapes of polyproline peptides.Roadmaps through free energy landscapes calculated using the multi-dimensional vFEP approach.Classical electrostatics for biomolecular simulations.Intrinsic Free Energy of the Conformational Transition of the KcsA Signature Peptide from Conducting to Nonconducting StateA classical molecular dynamics investigation of the free energy and structure of short polyproline conformers.Puckering free energy of pyranoses: A NMR and metadynamics-umbrella sampling investigation.Conformational free energies of methyl-alpha-L-iduronic and methyl-beta-D-glucuronic acids in water.Unbinding free energy of acetylcholinesterase bound oxime drugs along the gorge pathway from metadynamics-umbrella sampling investigation.Adaptively biased molecular dynamics for free energy calculations.Comparison between integrated and parallel tempering methods in enhanced sampling simulations.Binding Modes of Teixobactin to Lipid II: Molecular Dynamics Study.Constructing a multidimensional free energy surface like a spider weaving a web.Calculation of free energy landscapes: a histogram reweighted metadynamics approach.Sampling free energy surfaces as slices by combining umbrella sampling and metadynamics.A method for predicting protein conformational pathways by using molecular dynamics simulations guided by difference distance matrices.
P2860
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P2860
The free energy landscape of small peptides as obtained from metadynamics with umbrella sampling corrections
description
2006 nî lūn-bûn
@nan
2006 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2006 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2006年の論文
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2006年論文
@yue
2006年論文
@zh-hant
2006年論文
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2006年論文
@zh-mo
2006年論文
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2006年论文
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name
The free energy landscape of s ...... umbrella sampling corrections
@ast
The free energy landscape of s ...... umbrella sampling corrections
@en
The free energy landscape of s ...... umbrella sampling corrections
@nl
type
label
The free energy landscape of s ...... umbrella sampling corrections
@ast
The free energy landscape of s ...... umbrella sampling corrections
@en
The free energy landscape of s ...... umbrella sampling corrections
@nl
prefLabel
The free energy landscape of s ...... umbrella sampling corrections
@ast
The free energy landscape of s ...... umbrella sampling corrections
@en
The free energy landscape of s ...... umbrella sampling corrections
@nl
P2093
P2860
P356
P1476
The free energy landscape of s ...... umbrella sampling corrections
@en
P2093
Celeste Sagui
Christopher Roland
Thomas A Darden
Volodymyr Babin
P2860
P304
P356
10.1063/1.2393236
P407
P577
2006-11-28T00:00:00Z