MolMovDB: analysis and visualization of conformational change and structural flexibility - Wikidata - awgldk - TriplyDB

MolMovDB: analysis and visualization of conformational change and structural flexibility

MolMovDB: analysis and visualization of conformational change and structural flexibility

http://www.wikidata.org/entity/Q24681744

about

The X-ray crystal structures of human alpha-phosphomannomutase 1 reveal the structural basis of congenital disorder of glycosylation type 1a Molecular basis of ligand recognition and transport by glucose transporters Gaussian-weighted RMSD superposition of proteins: a structural comparison for flexible proteins and predicted protein structures.Open structure of the Ca2+ gating ring in the high-conductance Ca2+-activated K+ channel.Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility.Refinement of docked protein-ligand and protein-DNA structures using low frequency normal mode amplitude optimization.WEBnm@: a web application for normal mode analyses of proteins Assessing local structural perturbations in proteins Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics Rapid sampling of molecular motions with prior information constraints The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Molecular basis of BACH1/FANCJ recognition by TopBP1 in DNA replication checkpoint control Structural origins of DNA target selection and nucleobase extrusion by a DNA cytosine methyltransferase X-ray structure of the mammalian GIRK2–βγ G-protein complex Crystal structure of an orthologue of the NaChBac voltage-gated sodium channel.X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution Partial cooperative unfolding in proteins as observed by hydrogen exchange mass spectrometry.iGNM: a database of protein functional motions based on Gaussian Network Model.MORPH-PRO: a novel algorithm and web server for protein morphing Comparative analysis of protein structure alignments Sequence-similar, structure-dissimilar protein pairs in the PDB.Matt: local flexibility aids protein multiple structure alignment.CCProf: exploring conformational change profile of proteins.Single molecule optical measurements of orientation and rotations of biological macromolecules Predicting protein flexibility through the prediction of local structures.Towards the prediction of order parameters from molecular dynamics simulations in proteins.Structure-based engineering of internal cavities in coiled-coil peptides.Generation, comparison, and merging of pathways between protein conformations: gating in K-channels.Diversity of function-related conformational changes in proteins: coordinate uncertainty, fragment rigidity, and stability Solution structure of a designed cyclic peptide ligand for nickel and copper ions.Statistical and visual morph movie analysis of crystallographic mutant selection bias in protein mutation resource data.Docking protein domains in contact space.TMM@: a web application for the analysis of transmembrane helix mobility.Using least median of squares for structural superposition of flexible proteins Three dimensional shape comparison of flexible proteins using the local-diameter descriptor.IDSS: deformation invariant signatures for molecular shape comparison Large-scale evaluation of dynamically important residues in proteins predicted by the perturbation analysis of a coarse-grained elastic model Prediction of protein motions from amino acid sequence and its application to protein-protein interaction Ligand-free open-closed transitions of periplasmic binding proteins: the case of glutamine-binding protein.

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MolMovDB: analysis and visualization of conformational change and structural flexibility

http://www.wikidata.org/entity/Q24681744

description

2003 nî lūn-bûn

@nan

2003 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2003 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2003年の論文

@ja

2003年論文

@yue

2003年論文

@zh-hant

2003年論文

@zh-hk

2003年論文

@zh-mo

2003年論文

@zh-tw

2003年论文

@wuu

name

MolMovDB: analysis and visualization of conformational change and structural flexibility

@ast

MolMovDB: analysis and visualization of conformational change and structural flexibility

@en

MolMovDB: analysis and visualization of conformational change and structural flexibility

@nl

type

label

MolMovDB: analysis and visualization of conformational change and structural flexibility

@ast

MolMovDB: analysis and visualization of conformational change and structural flexibility

@en

MolMovDB: analysis and visualization of conformational change and structural flexibility

@nl

prefLabel

MolMovDB: analysis and visualization of conformational change and structural flexibility

@ast

MolMovDB: analysis and visualization of conformational change and structural flexibility

@en

MolMovDB: analysis and visualization of conformational change and structural flexibility

@nl

P1433

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P3181

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P1433

Nucleic Acids Research

P1476

MolMovDB: analysis and visualization of conformational change and structural flexibility

@en

P2093

Duncan Milburn

http://www.w3.org/2001/XMLSchema#string

P2860

The Protein Data Bank

The morph server: a standardized system for analyzing and visualizing macromolecular motions in a database framework.

A database of macromolecular motions

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

Structure of the 30S ribosomal subunit

SCOP: a structural classification of proteins database for the investigation of sequences and structures

CATH--a hierarchic classification of protein domain structures

Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic

The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acids

Structural mechanisms for domain movements in proteins.

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478-82

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scholarly article

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2021633

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10.1093/NAR/GKG104

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P433

1

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31

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Nathaniel Echols

Mark Bender Gerstein

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2003-01-01T00:00:00Z

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277522971

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12520056

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165551

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