Identifying combinatorial regulation of transcription factors and binding motifs
about
The transcriptional network activated by Cln3 cyclin at the G1-to-S transition of the yeast cell cycleCombinatorial regulation of transcription factors and microRNAsPositive feedback of G1 cyclins ensures coherent cell cycle entryDynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification.The cell cycle-regulated genes of Schizosaccharomyces pombe.Predicting transcription factor activities from combined analysis of microarray and ChIP data: a partial least squares approachDecomposition of RNA methylome reveals co-methylation patterns induced by latent enzymatic regulators of the epitranscriptomeGenome-scale study of the importance of binding site context for transcription factor binding and gene regulation.Differential analysis of high-throughput quantitative genetic interaction data.Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression DataInferring transcriptional modules from ChIP-chip, motif and microarray data.A computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--a case study using E2F1Analysis of time-series gene expression data: methods, challenges, and opportunities.Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data.REGNET: mining context-specific human transcription networks using composite genomic information.XcisClique: analysis of regulatory bicliquesPractical strategies for discovering regulatory DNA sequence motifs.Integrated assessment and prediction of transcription factor binding.Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle.MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifsBinding site graphs: a new graph theoretical framework for prediction of transcription factor binding sites.Revealing cell cycle control by combining model-based detection of periodic expression with novel cis-regulatory descriptorsIdentifying dynamical modules from genetic regulatory systems: applications to the segment polarity networkTopological comparison of methods for predicting transcriptional cooperativity in yeast.Embedding mRNA stability in correlation analysis of time-series gene expression dataIdentifying gene regulatory modules of heat shock response in yeast.GBNet: deciphering regulatory rules in the co-regulated genes using a Gibbs sampler enhanced Bayesian network approachPlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups.Systematic identification of yeast cell cycle transcription factors using multiple data sources.Combinatorial control of gene expression by the three yeast repressors Mig1, Mig2 and Mig3Identification of temporal association rules from time-series microarray data sets.Identification of yeast transcriptional regulation networks using multivariate random forestsReconstruct gene regulatory network using slice pattern modelNonlinear dynamic trans/cis regulatory circuit for gene transcription via microarray data.A Bayesian approach to joint modeling of protein-DNA binding, gene expression and sequence data.Inferring Transcriptional Interactions by the Optimal Integration of ChIP-chip and Knock-out DataPredicting protein-protein interactions in unbalanced data using the primary structure of proteinsAn overview of the importance of conformational flexibility in gene regulation by the transcription factors.Identifying estrogen receptor alpha target genes using integrated computational genomics and chromatin immunoprecipitation microarray.The reconstruction of condition-specific transcriptional modules provides new insights in the evolution of yeast AP-1 proteins.
P2860
Q21184036-6CE802FF-36C3-42ED-958F-A95EA588B773Q21202787-2CD694F8-86D7-4BEA-AA9F-44B7BEC71352Q24642340-2C7325F9-154A-49F8-92BB-6540CBB0AF0EQ24810551-F44BCED1-7398-443A-B7A6-B233BBA3DDCDQ24811746-8E88A714-BF2C-456B-9896-6CDC3F3F384CQ24816788-CE855346-F84A-42A5-A0E1-4E2538A7C0CCQ27335183-2DEADA32-1A5F-4C84-84A2-38EB905D504AQ30485579-F7B7595C-2792-4501-83B9-7C90B6F9EA38Q30583291-5A62A322-1C50-4449-A525-2E26F2B9E41BQ30943430-0B457A51-2655-4068-BEAA-AEDB311D07D1Q31039595-AB3B548A-250F-423F-B5D1-5302A367F2B8Q31068338-1D3C67C3-E349-4A5C-8CA6-966511F29934Q31104507-EE416CE4-C253-4B29-878E-08F7350499E6Q31115170-A91F04E1-7012-4C08-8040-5D2AB5379C52Q31165010-ECD31F9E-8CEC-41B9-B650-E2C40B9ACA41Q33240672-C851F28C-BED1-45A6-A774-7D9EB3D21488Q33242798-07AF27F6-333C-4F1B-83CA-62F63125133EQ33247445-8DF65DB5-7636-4A37-B539-F1B9D8FE7103Q33258839-54E0EDF5-2D5B-494A-BBED-0EF3B111065DQ33279685-138871DE-5945-4CE8-92C7-037490D61AADQ33284530-0EE596F9-BF89-4918-9A13-59590855410CQ33302858-EE0A0921-DF87-4356-9C96-F488474B5213Q33303931-9393E8B7-4A97-410D-926A-9F4344F9BD65Q33325735-6038CC0D-EFB2-4459-A167-45BADF3CC4A3Q33356599-EFDA6BB7-994B-445D-8E9F-A51C630544F1Q33371395-E5D9665E-FB0D-4123-B22B-FDEF0295A3E0Q33371403-7F97A4CE-14A8-41D3-BA11-4443E8E9A832Q33387422-0AEA4E8F-3BB1-4764-82C8-6155DE7344F2Q33390479-2D059CD1-CBB4-4F9F-8DD9-32CD09FD736EQ33393390-570A1E25-6FE4-4834-8B71-8AEA9DA57C04Q33426577-1586B6DA-7AF2-4E29-8075-DB7EA60D8264Q33471417-C7EB76B1-FBD6-4B01-A260-A28F71E99C7FQ33481238-CF2EDEC4-012C-4725-8290-ED9C452FA061Q33516559-D5B7FE61-BD80-4A04-B34A-CEB99CAEF25EQ33521939-F07DEF33-C7BB-40B6-9116-D537D9966F03Q33530060-76996F03-5DF4-44C0-9E40-CEF361AD5D46Q33548907-9D315F0C-2F32-462E-9B9F-9488005A646CQ33651837-91D567F4-9F88-4263-8090-9A8E77F32AA3Q33754130-92BA18DA-D370-45D2-B00D-942539CF6DC6Q33939751-8E0F165B-EC71-468A-9D9F-5E7F5008D184
P2860
Identifying combinatorial regulation of transcription factors and binding motifs
description
2004 nî lūn-bûn
@nan
2004 թուականին հրատարակուած գիտական յօդուած
@hyw
2004 թվականին հրատարակված գիտական հոդված
@hy
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
name
Identifying combinatorial regulation of transcription factors and binding motifs
@ast
Identifying combinatorial regulation of transcription factors and binding motifs
@en
Identifying combinatorial regulation of transcription factors and binding motifs
@nl
type
label
Identifying combinatorial regulation of transcription factors and binding motifs
@ast
Identifying combinatorial regulation of transcription factors and binding motifs
@en
Identifying combinatorial regulation of transcription factors and binding motifs
@nl
prefLabel
Identifying combinatorial regulation of transcription factors and binding motifs
@ast
Identifying combinatorial regulation of transcription factors and binding motifs
@en
Identifying combinatorial regulation of transcription factors and binding motifs
@nl
P2093
P2860
P3181
P356
P1433
P1476
Identifying combinatorial regulation of transcription factors and binding motifs
@en
P2093
Bruce Futcher
Mamoru Kato
Michael Q Zhang
Naoya Hata
Nilanjana Banerjee
P2860
P2888
P3181
P356
10.1186/GB-2004-5-8-R56
P407
P577
2004-01-01T00:00:00Z
P5875
P6179
1010980355