Protein secondary structure assignment revisited: a detailed analysis of different assignment methods. - Wikidata - awgldk - TriplyDB

Protein secondary structure assignment revisited: a detailed analysis of different assignment methods.

Protein secondary structure assignment revisited: a detailed analysis of different assignment methods.

http://www.wikidata.org/entity/Q24816909

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Minimum message length inference of secondary structure from protein coordinate data Assignment of PolyProline II conformation and analysis of sequence--structure relationship The Crystal Structure of a Binary Complex of two Pseudopilins: EpsI and EpsJ from the Type 2 Secretion System of Vibrio vulnificus Structure of the Minor Pseudopilin EpsH from the Type 2 Secretion System of Vibrio cholerae Backbone relaxation coupled to the ionization of internal groups in proteins: a self-guided Langevin dynamics study.β-Bulges: extensive structural analyses of β-sheets irregularities.Dihedral angle and secondary structure database of short amino acid fragments.The membrane- and soluble-protein helix-helix interactome: similar geometry via different interactions.Identification of local variations within secondary structures of proteins.An Algorithm for Protein Helix Assignment Using Helix Geometry.A New Secondary Structure Assignment Algorithm Using Cα Backbone Fragments.Fast and accurate protein substructure searching with simulated annealing and GPUs Accurate Prediction of One-Dimensional Protein Structure Features Using SPINE-X.Protein domain assignment from the recurrence of locally similar structures.A short survey on protein blocks.SheeP: A tool for description of β-sheets in protein 3D structures.A method for WD40 repeat detection and secondary structure prediction.A Consensus Data Mining secondary structure prediction by combining GOR V and Fragment Database Mining.Analysis of an optimal hidden Markov model for secondary structure prediction.2Struc: the secondary structure server.RNAmap2D - calculation, visualization and analysis of contact and distance maps for RNA and protein-RNA complex structures.SPINE X: improving protein secondary structure prediction by multistep learning coupled with prediction of solvent accessible surface area and backbone torsion angles BCL::SAXS: GPU accelerated Debye method for computation of small angle X-ray scattering profiles.Extension of the classical classification of β-turns.Knowledge-based computational intelligence development for predicting protein secondary structures from sequences.Analysis of loop boundaries using different local structure assignment methods.From local structure to a global framework: recognition of protein folds.Profiles and majority voting-based ensemble method for protein secondary structure prediction.Recent advances on polyproline II.Self-guided Langevin dynamics study of regulatory interactions in NtrC.Amino Acids in Nine Ligand-Prefer Ramachandran Regions Protein beta-turn assignments.Interactive comparison and remediation of collections of macromolecular structures.Comprehensive analysis of the helix-X-helix motif in soluble proteins.Leishmania infantum 5'-Methylthioadenosine Phosphorylase presents relevant structural divergence to constitute a potential drug target.ScrewFit: combining localization and description of protein secondary structure.Super Secondary Structure Consisting of a Polyproline II Helix and a β-Turn in Leucine Rich Repeats in Bacterial Type III Secretion System Effectors.SOV_refine: A further refined definition of segment overlap score and its significance for protein structure similarity.

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P2860

Protein secondary structure assignment revisited: a detailed analysis of different assignment methods.

http://www.wikidata.org/entity/Q24816909

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2005 nî lūn-bûn

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2005 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

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2005 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2005年の論文

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2005年論文

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2005年論文

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2005年論文

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2005年論文

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2005年论文

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Antoine Marin

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Guillaume Letellier

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Jean-François Gibrat

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P2860

The Protein Data Bank

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

Use of a structural alphabet for analysis of short loops connecting repetitive structures

Protein secondary structure prediction based on position-specific scoring matrices

VMD: visual molecular dynamics

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

SCOP: a structural classification of proteins database for the investigation of sequences and structures

Comparative protein modelling by satisfaction of spatial restraints

CATH--a hierarchic classification of protein domain structures

The ASTRAL compendium for protein structure and sequence analysis

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1

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7597895

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protein structure

structural biology

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