Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit
about
Crystal structure determination and site-directed mutagenesis of the Pyrococcus abyssi aCBF5-aNOP10 complex reveal crucial roles of the C-terminal domains of both proteins in H/ACA sRNP activity.Crystal structure of the catalytic domain of RluD, the only rRNA pseudouridine synthase required for normal growth of Escherichia coliThe Crystal Structure of E. coli rRNA Pseudouridine Synthase RluEH/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modificationHow U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruAStructural genomics reveals EVE as a new ASCH/PUA-related domainCrystal Structure of an RluF–RNA Complex: A Base-Pair Rearrangement Is the Key to Selectivity of RluF for U2604 of the RibosomeStructural and functional evidence of high specificity of Cbf5 for ACA trinucleotideIn Human Pseudouridine Synthase 1 (hPus1), a C-Terminal Helical Insert Blocks tRNA from Binding in the Same Orientation as in the Pus1 Bacterial Homologue TruA, Consistent with Their Different Target SelectivitiesCrystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrateThe mechanism of pseudouridine synthases from a covalent complex with RNA, and alternate specificity for U2605 versus U2604 between close homologsSteroid receptor RNA activator (SRA) modification by the human pseudouridine synthase 1 (hPus1p): RNA binding, activity, and atomic modelThe carboxyl-terminal extension of yeast tRNA m5C methyltransferase enhances the catalytic efficiency of the amino-terminal domain.Pseudouridine synthase 1: a site-specific synthase without strict sequence recognition requirementsThe ASCH superfamily: novel domains with a fold related to the PUA domain and a potential role in RNA metabolism.Prediction of interacting single-stranded RNA bases by protein-binding patternsA protein-RNA docking benchmark (I): nonredundant cases.Crystal structure of the apo forms of psi 55 tRNA pseudouridine synthase from Mycobacterium tuberculosis: a hinge at the base of the catalytic cleft.X-ray structure of tRNA pseudouridine synthase TruD reveals an inserted domain with a novel fold.Crystal structure of the highly divergent pseudouridine synthase TruD reveals a circular permutation of a conserved foldPrecursor complex structure of pseudouridine synthase TruB suggests coupling of active site perturbations to an RNA-sequestering peripheral protein domain.Crystal structure of Bacillus subtilis TrmB, the tRNA (m7G46) methyltransferaseCysteine of sequence motif VI is essential for nucleophilic catalysis by yeast tRNA m5C methyltransferase.Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of an ASCH domain-containing protein from Zymomonas mobilis ZM4.Archaeal Pus10 proteins can produce both pseudouridine 54 and 55 in tRNAPrediction of RNA binding sites in proteins from amino acid sequenceFormation of the conserved pseudouridine at position 55 in archaeal tRNAPre-steady-state kinetic analysis of the three Escherichia coli pseudouridine synthases TruB, TruA, and RluA reveals uniformly slow catalysisMajor reorientation of tRNA substrates defines specificity of dihydrouridine synthases.Contribution of two conserved histidines to the dual activity of archaeal RNA guide-dependent and -independent pseudouridine synthase Cbf5.Structure of the pseudouridine synthase RsuA from Haemophilus influenzae.Identification of determinants in the protein partners aCBF5 and aNOP10 necessary for the tRNA:Psi55-synthase and RNA-guided RNA:Psi-synthase activities.Pseudouridine: still mysterious, but never a fake (uridine)!Substrate recognition by RNA 5-methyluridine methyltransferases and pseudouridine synthases: a structural perspective.Unveiling substrate RNA binding to H/ACA RNPs: one side fits all.Catalysis by the second class of tRNA(m1G37) methyl transferase requires a conserved prolineThe PUA domain - a structural and functional overview.Mechanistic investigations of the pseudouridine synthase RluA using RNA containing 5-fluorouridinePurification, crystallization and preliminary X-ray crystallographic study of the tRNA pseudouridine synthase TruB from Streptococcus pneumoniaeTowards the development of universal, fast and highly accurate docking/scoring methods: a long way to go.
P2860
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P2860
Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit
description
2003 nî lūn-bûn
@nan
2003 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2003 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2003年の論文
@ja
2003年論文
@yue
2003年論文
@zh-hant
2003年論文
@zh-hk
2003年論文
@zh-mo
2003年論文
@zh-tw
2003年论文
@wuu
name
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@ast
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@en
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@nl
type
label
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@ast
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@en
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@nl
prefLabel
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@ast
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@en
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@nl
P2093
P2860
P356
P1476
Structure of tRNA pseudouridin ...... rigid docking and induced fit
@en
P2093
Demetri T Moustakas
Janet Finer-Moore
Robert M Stroud
Sanjay Agarwalla
P2860
P304
P356
10.1073/PNAS.2135585100
P407
P577
2003-10-28T00:00:00Z