Enzymatic capture of an extrahelical thymine in the search for uracil in DNA - Wikidata - awgldk - TriplyDB

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

http://www.wikidata.org/entity/Q27647377

about

Lesion processing by a repair enzyme is severely curtailed by residues needed to prevent aberrant activity on undamaged DNA Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA Early steps in the DNA base excision/single-strand interruption repair pathway in mammalian cells DNA glycosylases: in DNA repair and beyond Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis Crystal structure of DNA-bound Co(III){middle dot}bleomycin B2: Insights on intercalation and minor groove binding Crystal structure of trioxacarcin A covalently bound to DNA The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix UHRF1, a modular multi-domain protein, regulates replication-coupled crosstalk between DNA methylation and histone modifications The cis -(5 R ,6 S )-Thymine Glycol Lesion Occupies the Wobble Position When Mismatched with Deoxyguanosine in DNA Entrapment and Structure of an Extrahelical Guanine Attempting to Enter the Active Site of a Bacterial DNA Glycosylase, MutM Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme Structure of Escherichia coli AlkA in Complex with Undamaged DNA Excision of 5-hydroxymethyluracil and 5-carboxylcytosine by the thymine DNA glycosylase domain: its structural basis and implications for active DNA demethylation Strandwise translocation of a DNA glycosylase on undamaged DNA Duplex interrogation by a direct DNA repair protein in search of base damage The DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction Twist-open mechanism of DNA damage recognition by the Rad4/XPC nucleotide excision repair complex Uracil-DNA glycosylase: Structural, thermodynamic and kinetic aspects of lesion search and recognition Mechanism of MutS searching for DNA mismatches and signaling repair A two-step nucleotide-flipping mechanism enables kinetic discrimination of DNA lesions by AGT Nontarget DNA binding shapes the dynamic landscape for enzymatic recognition of DNA damage.Exploring damage recognition models in prokaryotic nucleotide excision repair with a benzo[a]pyrene-derived lesion in UvrB Uracil DNA glycosylase: revisiting substrate-assisted catalysis by DNA phosphate anions.Bridging the solution divide: comprehensive structural analyses of dynamic RNA, DNA, and protein assemblies by small-angle X-ray scattering.Predicting protein-DNA interactions by full search computational docking.Dynamics of spontaneous flipping of a mismatched base in DNA duplex.Solid state 2H NMR analysis of furanose ring dynamics in DNA containing uracil Characterization of DNA with an 8-oxoguanine modification.Nucleosomes suppress the formation of double-strand DNA breaks during attempted base excision repair of clustered oxidative damages Recent advances in the structural mechanisms of DNA glycosylases Identification of Escherichia coli mismatch-specific uracil DNA glycosylase as a robust xanthine DNA glycosylase.Critical role of DNA intercalation in enzyme-catalyzed nucleotide flipping Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helix.On the molecular basis of uracil recognition in DNA: comparative study of T-A versus U-A structure, dynamics and open base pair kinetics.Substitution of active site tyrosines with tryptophan alters the free energy for nucleotide flipping by human alkyladenine DNA glycosylase.Dynamics of uracil and 5-fluorouracil in DNA.Active destabilization of base pairs by a DNA glycosylase wedge initiates damage recognition Differential stabilities and sequence-dependent base pair opening dynamics of Watson-Crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.Kinetic gating mechanism of DNA damage recognition by Rad4/XPC

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Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

http://www.wikidata.org/entity/Q27647377

description

2007 nî lūn-bûn

@nan

2007 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2007 թվականի սեպտեմբերին հրատարակված գիտական հոդված

@hy

2007年の論文

@ja

2007年論文

@yue

2007年論文

@zh-hant

2007年論文

@zh-hk

2007年論文

@zh-mo

2007年論文

@zh-tw

2007年论文

@wuu

name

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@ast

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@en

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@nl

type

label

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@ast

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@en

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@nl

prefLabel

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@ast

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@en

Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

@nl

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Enzymatic capture of an extrahelical thymine in the search for uracil in DNA

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P2093

Daniel J Krosky

http://www.w3.org/2001/XMLSchema#string

James T Stivers

http://www.w3.org/2001/XMLSchema#string

Jared B Parker

http://www.w3.org/2001/XMLSchema#string

Joshua I Friedman

http://www.w3.org/2001/XMLSchema#string

P2860

Uracil-DNA glycosylase-DNA substrate and product structures: conformational strain promotes catalytic efficiency by coupled stereoelectronic effects

Excision of cytosine and thymine from DNA by mutants of human uracil-DNA glycosylase

Linking uracil base excision repair and 5-fluorouracil toxicity in yeast

Processing of X-ray diffraction data collected in oscillation mode

Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited

Heteronuclear NMR and crystallographic studies of wild-type and H187Q Escherichia coli uracil DNA glycosylase: electrophilic catalysis of uracil expulsion by a neutral histidine 187

A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA

Likelihood-enhanced fast translation functions

Further additions to MolScript version 1.4, including reading and contouring of electron-density maps

The CCP4 suite: programs for protein crystallography

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433-7

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scholarly article

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10.1038/NATURE06131

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7161

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449

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Mario A Bianchet

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2007-09-27T00:00:00Z

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6134578

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1042609488

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17704764

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2754044

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