Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome - Wikidata - awgldk - TriplyDB

Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

http://www.wikidata.org/entity/Q27648798

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Complete genome sequence of Archaeoglobus profundus type strain (AV18)Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes The role of mRNA structure in bacterial translational regulation Initiation of mRNA translation in bacteria: structural and dynamic aspects Frameshifting dynamics Single-molecule analysis of translational dynamics Structure of ERA in complex with the 3' end of 16S rRNA: Implications for ribosome biogenesis Crystal structure of the eukaryotic ribosome Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1 Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations Nob1 binds the single-stranded cleavage site D at the 3'-end of 18S rRNA with its PIN domain.Complementary roles of initiation factor 1 and ribosome recycling factor in 70S ribosome splitting.Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM The Cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli Navigating the ribosome's metastable energy landscape Molecular mechanics of 30S subunit head rotation.One core, two shells: bacterial and eukaryotic ribosomes.An extended Shine-Dalgarno sequence in mRNA functionally bypasses a vital defect in initiator tRNA.Ribosome excursions during mRNA translocation mediate broad branching of frameshift pathways Haloferax volcanii, a prokaryotic species that does not use the Shine Dalgarno mechanism for translation initiation at 5'-UTRs.Shine-Dalgarno interaction prevents incorporation of noncognate amino acids at the codon following the AUG Deep sequencing reveals global patterns of mRNA recruitment during translation initiation Structural dynamics of the ribosome.RNA switches regulate initiation of translation in bacteria.An evolutionarily conserved element in initiator tRNAs prompts ultimate steps in ribosome maturation.Multistart simulated annealing refinement of the crystal structure of the 70S ribosome.Bases in 16S rRNA important for subunit association, tRNA binding, and translocation.Structure of the 70S ribosome from human pathogen Staphylococcus aureus.Structural Insights into tRNA Dynamics on the Ribosome.Synonymous codon bias as a basis for novel antibiotic design: from nucleotide wobble constraint to ribosomal garrotte.One-bead coarse-grained model for RNA dynamics.Control of translation initiation involves a factor-induced rearrangement of helix 44 of 16S ribosomal RNA DOMMINO 2.0: integrating structurally resolved protein-, RNA-, and DNA-mediated macromolecular interactions.Analysis of structural dynamics in the ribosome by TLS crystallographic refinement.Structure and mechanical properties of the ribosomal L1 stalk three-way junction.Is the cellular initiation of translation an exclusive property of the initiator tRNAs?A role for the 30S subunit E site in maintenance of the translational reading frame.The ribosome structure controls and directs mRNA entry, translocation and exit dynamics Long and branched polyamines are required for maintenance of the ribosome, tRNAHis and tRNATyr in Thermus thermophilus cells at high temperatures.

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

http://www.wikidata.org/entity/Q27648798

description

2007 nî lūn-bûn

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2007 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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2007年の論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年論文

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2007年论文

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name

Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Proceedings of the National Academy of Sciences of the United States of America

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Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome

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Andrei Korostelev

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Harry F Noller

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Haruichi Asahara

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Laura Lancaster

http://www.w3.org/2001/XMLSchema#string

Martin Laurberg

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Sergei Trakhanov

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P2860

Structure of betaine aldehyde dehydrogenase at 2.1 A resolution

The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs

The path of messenger RNA through the ribosome

Refinement of the arginine kinase transition-state analogue complex at 1.2 A resolution: mechanistic insights

Study of the structural dynamics of the E coli 70S ribosome using real-space refinement

A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interaction

Structure of the shiga-like toxin I B-pentamer complexed with an analogue of its receptor Gb3

Macromolecular TLS refinement in REFMAC at moderate resolutions

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10.1073/PNAS.0707850104

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43

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104

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17940016

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