Improved Cross Validation of a Static Ubiquitin Structure Derived from High Precision Residual Dipolar Couplings Measured in a Drug-Based Liquid Crystalline Phase - Wikidata - awgldk - TriplyDB

Improved Cross Validation of a Static Ubiquitin Structure Derived from High Precision Residual Dipolar Couplings Measured in a Drug-Based Liquid Crystalline Phase

Improved Cross Validation of a Static Ubiquitin Structure Derived from High Precision Residual Dipolar Couplings Measured in a Drug-Based Liquid Crystalline Phase

http://www.wikidata.org/entity/Q27681903

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Structural Studies of a Rationally Selected Multi-Drug Resistant HIV-1 Protease Reveal Synergistic Effect of Distal Mutations on Flap Dynamics High accuracy of Karplus equations for relating three-bond J couplings to protein backbone torsion angles.Information content of long-range NMR data for the characterization of conformational heterogeneity.MERA: a webserver for evaluating backbone torsion angle distributions in dynamic and disordered proteins from NMR data.Pressure-induced structural transition of mature HIV-1 protease from a combined NMR/MD simulation approach.Accurate measurement of (3)J(HNHα) couplings in small or disordered proteins from WATERGATE-optimized TROSY spectra.A maximum entropy approach to the study of residue-specific backbone angle distributions in α-synuclein, an intrinsically disordered protein.Conformation of inhibitor-free HIV-1 protease derived from NMR spectroscopy in a weakly oriented solution Quantitative residue-specific protein backbone torsion angle dynamics from concerted measurement of 3J couplings Quantitative evaluation of positive ϕ angle propensity in flexible regions of proteins from three-bond J couplings ENCORE: Software for Quantitative Ensemble Comparison.Side Chain Conformational Distributions of a Small Protein Derived from Model-Free Analysis of a Large Set of Residual Dipolar Couplings Monomeric Aβ(1-40) and Aβ(1-42) Peptides in Solution Adopt Very Similar Ramachandran Map Distributions That Closely Resemble Random Coil.Identification and Characterization of miRNAs in Chondrus crispus by High-Throughput Sequencing and Bioinformatics Analysis.ARTSY-J: Convenient and precise measurement of (3)JHNHα couplings in medium-size proteins from TROSY-HSQC spectra.NMR studies of dynamic biomolecular conformational ensembles.Combining experimental and simulation data of molecular processes via augmented Markov models.Hybrid Approaches to Structural Characterization of Conformational Ensembles of Complex Macromolecular Systems Combining NMR Residual Dipolar Couplings and Solution X-ray Scattering.Structure restraints from heteronuclear pseudocontact shifts generated by lanthanide tags at two different sites.Site-specific tagging proteins with a rigid, small and stable transition metal chelator, 8-hydroxyquinoline, for paramagnetic NMR analysis.Predicting protein dynamics from structural ensembles.Ensembles of a small number of conformations with relative populations.Mollib: a molecular and NMR data analysis software.Conformational Selection in a Protein-Protein Interaction Revealed by Dynamic Pathway Analysis.Stable and rigid DTPA-like paramagnetic tags suitable for in vitro and in situ protein NMR analysis.Short two-armed lanthanide-binding tags for paramagnetic NMR spectroscopy based on chiral 1,4,7,10-tetrakis(2-hydroxypropyl)-1,4,7,10-tetraazacyclododecane scaffolds.Installation of a Rigid EDTA-Like Motif into a Protein α-Helix for Paramagnetic NMR Spectroscopy with Cobalt(II) Ions.Microsecond Dynamics in Ubiquitin Probed by Solid-State 15 N NMR Spectroscopy R1ρ Relaxation Experiments under Fast MAS (60-110 kHz).Enantiomeric two-armed lanthanide-binding tags for complementary effects in paramagnetic NMR spectroscopy.Compact, hydrophilic, lanthanide-binding tags for paramagnetic NMR spectroscopy.

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P2860

Improved Cross Validation of a Static Ubiquitin Structure Derived from High Precision Residual Dipolar Couplings Measured in a Drug-Based Liquid Crystalline Phase

http://www.wikidata.org/entity/Q27681903

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Alexander S Maltsev

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Julien Roche

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Michael Zasloff

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Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution

Weak Long-Range Correlated Motions in a Surface Patch of Ubiquitin Involved in Molecular Recognition

Integrated description of protein dynamics from room-temperature X-ray crystallography and NMR

Structure of ubiquitin refined at 1.8 A resolution

Solution NMR of proteins within polyacrylamide gels: diffusional properties and residual alignment by mechanical stress or embedding of oriented purple membranes

NMR structures of biomolecules using field oriented media and residual dipolar couplings

A novel approach to the retrieval of structural and dynamic information from residual dipolar couplings using several oriented media in biomolecular NMR spectroscopy

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3752-3755

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10.1021/JA4132642

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10

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136

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Alexander Grishaev

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260380612

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24568736

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3954408

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