CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
about
Toward high-resolution homology modeling of antibody Fv regions and application to antibody-antigen dockingThe RosettaDock server for local protein-protein dockingFastContact: a free energy scoring tool for protein-protein complex structuresRefining near-native protein-protein docking decoys by local resampling and energy minimizationComputational approaches to study the effects of small genomic variations.Reconstitution and engineering of apoptotic protein interactions on the bacterial cell surface.Extending RosettaDock with water, sugar, and pH for prediction of complex structures and affinities for CAPRI rounds 20-27New compstatin variants through two de novo protein design frameworks.Anchored design of protein-protein interfaces.Computational methods for de novo protein design and its applications to the human immunodeficiency virus 1, purine nucleoside phosphorylase, ubiquitin specific protease 7, and histone demethylases.Benchmarking and analysis of protein docking performance in Rosetta v3.2.Discovery of entry inhibitors for HIV-1 via a new de novo protein design framework.A generalized approach to sampling backbone conformations with RosettaDock for CAPRI rounds 13-19De novo peptide design and experimental validation of histone methyltransferase inhibitors.Molecular dynamics in drug design: new generations of compstatin analogs.Discovery of small molecule inhibitors of MyD88-dependent signaling pathways using a computational screenConformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles.Microsecond Molecular Dynamics Simulations of Influenza Neuraminidase Suggest a Mechanism for the Increased Virulence of Stalk-Deletion Mutants.Solution- and adsorbed-state structural ensembles predicted for the statherin-hydroxyapatite system.Protein WISDOM: a workbench for in silico de novo design of biomoleculesA combination of rescoring and refinement significantly improves protein docking performanceDevelopment of a novel bioinformatics tool for in silico validation of protein interactions.GRAMM-X public web server for protein-protein docking.Using the natural evolution of a rotavirus-specific human monoclonal antibody to predict the complex topography of a viral antigenic site.A new method for ligand docking to flexible receptors by dual alanine scanning and refinement (SCARE).Identification of a ubiquitin-binding interface using Rosetta and DEER.Balance of Anti-CD123 Chimeric Antigen Receptor Binding Affinity and Density for the Targeting of Acute Myeloid Leukemia.Efficient flexible backbone protein-protein docking for challenging targets
P2860
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P2860
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
description
2005 nî lūn-bûn
@nan
2005 թուականի Օգոստոսին հրատարակուած գիտական յօդուած
@hyw
2005 թվականի օգոստոսին հրատարակված գիտական հոդված
@hy
2005年の論文
@ja
2005年論文
@yue
2005年論文
@zh-hant
2005年論文
@zh-hk
2005年論文
@zh-mo
2005年論文
@zh-tw
2005年论文
@wuu
name
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@ast
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@en
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@nl
type
label
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@ast
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@en
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@nl
prefLabel
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@ast
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@en
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@nl
P2093
P3181
P356
P1433
P1476
CAPRI rounds 3-5 reveal promising successes and future challenges for RosettaDock
@en
P2093
Arvind Sivasubramanian
David Masica
Michael D Daily
Sony Somarouthu
P3181
P356
10.1002/PROT.20555
P407
P577
2005-08-01T00:00:00Z