Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis
about
Comparative and evolutionary analysis of the bacterial homologous recombination systemsTesting the ortholog conjecture with comparative functional genomic data from mammalsAnnotation error in public databases: misannotation of molecular function in enzyme superfamiliesFunctional classification using phylogenomic inferenceGenomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath)A simple, fast, and accurate method of phylogenomic inferenceSurprising complexity of the ancestral apoptosis networkProceedings of the First International Conference on Phylogenomics. March 15-19, 2006. Quebec, CanadaA fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysisGene function classification using Bayesian models with hierarchy-based priorsPhylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elementsResolving the ortholog conjecture: orthologs tend to be weakly, but significantly, more similar in function than paralogsThe complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.Genome sequence of the human malaria parasite Plasmodium falciparumIdentification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomicsA phylogenomic study of the MutS family of proteinsPhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictionseggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic rangesMatGAT: an application that generates similarity/identity matrices using protein or DNA sequencesInter-genomic displacement via lateral gene transfer of bacterial trp operons in an overall context of vertical genealogyRIO: analyzing proteomes by automated phylogenomics using resampled inference of orthologs.Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkBCan sequence determine function?Protein molecular function prediction by Bayesian phylogenomics.Phydbac "Gene Function Predictor": a gene annotation tool based on genomic context analysis.A rigorous method for multigenic families' functional annotation: the peptidyl arginine deiminase (PADs) proteins family example.TreeFam: a curated database of phylogenetic trees of animal gene familiesInsect phylogenomicsMicrobial diversity--exploration of natural ecosystems and microbiomesUsing biological networks to improve our understanding of infectious diseasesCharacterization of multiple sequence alignment errors using complete-likelihood score and position-shift mapUsing genes as characters and a parsimony analysis to explore the phylogenetic position of turtlesGenesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspectiveA land-plant-specific glycerol-3-phosphate acyltransferase family in Arabidopsis: substrate specificity, sn-2 preference, and evolutionIsolation of Hox cluster genes from insects reveals an accelerated sequence evolution rateUsing phylogenomic patterns and gene ontology to identify proteins of importance in plant evolutionGetting started in structural phylogenomicsMolecular evolution and functional divergence of the bestrophin protein familyInitial implementation of a comparative data analysis ontologyIntegrating protein structures and precomputed genealogies in the Magnum database: examples with cellular retinoid binding proteins.
P2860
Q21092503-A4651578-C903-424B-A181-FA433CFD06F8Q21145323-D1023DE4-E7DB-41F6-9C05-810FE9A72E26Q21145347-42FAED99-65B9-42BD-BC7C-EC5105F79331Q21145680-7336017B-25ED-4CE0-8813-06E6B637DABDQ21146404-B7CB3A65-B960-4BD3-B97B-3BB5E4280BA5Q21184110-ABFFA37B-7EBF-4A67-86B2-AB70880E6E6BQ21184136-96EDA5BE-C144-409A-AA5C-4CD8D5CA7232Q21283902-D6143492-3968-4BA6-8678-CED81F030B0BQ21283948-7EEF30AE-14FC-4616-8401-F0923D763096Q21284251-65627FE6-D2AB-499B-8D2A-1981F7F415FAQ21563646-9FA49752-AD0B-406A-A992-0BB9C5923025Q22065253-DC70A619-F6AD-4763-8DAF-770784F3AB06Q22066260-07DA2282-D65F-40F6-8D3F-583F47F02712Q22122524-DD95B8F0-E018-44D6-8498-EB18BDA028EEQ22254097-3EACAF43-F19F-4BE1-B8B7-0C4F4CF45A3DQ24548238-5B178EF7-927D-4BD2-BEBE-6E37C2ABC9CBQ24612855-5E922314-76AE-49F7-916B-379E7D1E0C59Q24619608-B7225413-043A-4700-B9C7-EA14A0694340Q24791448-D23378A0-9C8E-45B4-8719-0B687A19CEB5Q24792389-C345980B-E42A-4B92-BE83-F84B5DCE7D83Q24796621-F3AC0A67-D92B-4875-B678-479DA72AB7FEQ24804742-B7FE22B0-3CBC-49EC-ABA1-16469B436D70Q24804858-CD665B09-3975-464E-8F92-A6EFA8664D7FQ24814913-5F7F42CB-D0D9-44AC-8FBB-5FD242AEE041Q24815778-D163CA0A-9537-4E40-911A-EF22AF4357ACQ24816463-EF41E8F2-C8F0-440C-A424-CF3B9F8E5E0EQ25256560-AAEEA6EA-120E-4BD5-91D1-2D783F939438Q26314439-BA439AD8-C389-4918-9A63-B2D1D9074465Q26776351-B7B981A1-4D82-4837-B4DC-1F7372C04C18Q27005781-3064EEB1-9F44-4D6B-A41C-8ADEA1201F9BQ27319430-3C0F3348-D9C9-4D32-A63A-8417AAAE6E3DQ28661499-66F94925-D4F6-4E77-AF89-B438956E9DD1Q28682334-22C60C1B-60CA-4785-9F02-29E8DA9D5271Q28727372-74E8CB53-1F64-490C-B703-A93A133B4433Q28728712-23EDB545-2BE1-475D-B373-685C1CABA08AQ28744456-27EDDBB2-1D87-4DD4-8B82-53FF4AC36B48Q28749140-775C6D0E-0915-4FE8-81C1-4414EC2843EBQ28755129-5C11C5BA-72B3-491A-97FD-5789E8E5C435Q28765967-B8CD5D81-8CE9-4AF9-BFAD-257BD1FFD04FQ28768587-4EB6EF98-A736-4A2B-A935-9AE393CF27BB
P2860
Phylogenomics: improving functional predictions for uncharacterized genes by evolutionary analysis
description
1998 nî lūn-bûn
@nan
1998 թուականի Մարտին հրատարակուած գիտական յօդուած
@hyw
1998 թվականի մարտին հրատարակված գիտական հոդված
@hy
1998年の論文
@ja
1998年論文
@yue
1998年論文
@zh-hant
1998年論文
@zh-hk
1998年論文
@zh-mo
1998年論文
@zh-tw
1998年论文
@wuu
name
Phylogenomics: improving funct ...... genes by evolutionary analysis
@ast
Phylogenomics: improving funct ...... genes by evolutionary analysis
@en
Phylogenomics: improving funct ...... genes by evolutionary analysis
@nl
type
label
Phylogenomics: improving funct ...... genes by evolutionary analysis
@ast
Phylogenomics: improving funct ...... genes by evolutionary analysis
@en
Phylogenomics: improving funct ...... genes by evolutionary analysis
@nl
prefLabel
Phylogenomics: improving funct ...... genes by evolutionary analysis
@ast
Phylogenomics: improving funct ...... genes by evolutionary analysis
@en
Phylogenomics: improving funct ...... genes by evolutionary analysis
@nl
P2860
P3181
P356
P1433
P1476
Phylogenomics: improving funct ...... genes by evolutionary analysis
@en
P2860
P3181
P356
10.1101/GR.8.3.163
P407
P577
1998-03-01T00:00:00Z