Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads - Wikidata - awgldk - TriplyDB

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

http://www.wikidata.org/entity/Q28296838

about

Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species SSW library: an SIMD Smith-Waterman C/C++ library for use in genomic applications COPS: a sensitive and accurate tool for detecting somatic Copy Number Alterations using short-read sequence data from paired samples Microevolutionary analysis of Clostridium difficile genomes to investigate transmission Population genomics of the fission yeast Schizosaccharomyces pombe Customisation of the exome data analysis pipeline using a combinatorial approach Joint assembly and genetic mapping of the Atlantic horseshoe crab genome reveals ancient whole genome duplication The genomic landscape underlying phenotypic integrity in the face of gene flow in crows Repetitive DNA and next-generation sequencing: computational challenges and solutions The Capsella rubella genome and the genomic consequences of rapid mating system evolution A heterozygous moth genome provides insights into herbivory and detoxification Exome sequencing identifies NBEAL2 as the causative gene for gray platelet syndrome Germline mutations affecting the proofreading domains of POLE and POLD1 predispose to colorectal adenomas and carcinomas Extracting functional trends from whole genome duplication events using comparative genomics Transcriptome Analysis in Domesticated Species: Challenges and Strategies Alignment of Short Reads: A Crucial Step for Application of Next-Generation Sequencing Data in Precision Medicine Natural selection constrains neutral diversity across a wide range of species Unlocking the bottleneck in forward genetics using whole-genome sequencing and identity by descent to isolate causative mutations Recessive mutations in SPTBN2 implicate β-III spectrin in both cognitive and motor development Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis Major Improvements to the Heliconius melpomene Genome Assembly Used to Confirm 10 Chromosome Fusion Events in 6 Million Years of Butterfly Evolution.SInC: an accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data Genotyping by sequencing approaches to characterise crop genomes: choosing the right tool for the right application Sparse whole-genome sequencing identifies two loci for major depressive disorder QualComp: a new lossy compressor for quality scores based on rate distortion theory NextGenMap: fast and accurate read mapping in highly polymorphic genomes Mosaic PPM1D mutations are associated with predisposition to breast and ovarian cancer Insights from genomics into bacterial pathogen populations Periventricular heterotopia in 6q terminal deletion syndrome: role of the C6orf70 gene Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis Stable recombination hotspots in birds Improved genome inference in the MHC using a population reference graph Examining phylogenetic relationships among gibbon genera using whole genome sequence data using an approximate bayesian computation approach MaxSSmap: a GPU program for mapping divergent short reads to genomes with the maximum scoring subsequence Brain transcriptome sequencing and assembly of three songbird model systems for the study of social behavior Single Nucleotide Polymorphism (SNP) Detection and Genotype Calling from Massively Parallel Sequencing (MPS) Data Asymptomatic Clostridium difficile colonisation and onward transmission Short-term genome stability of serial Clostridium difficile ribotype 027 isolates in an experimental gut model and recurrent human disease Detection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmission

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

http://www.wikidata.org/entity/Q28296838

description

2011 nî lūn-bûn

@nan

2011 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հունիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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prefLabel

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Genome Research

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Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Martin Goodson

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P2860

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

RNA-Seq: a revolutionary tool for transcriptomics

A map of human genome variation from population-scale sequencing

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Fast and accurate short read alignment with Burrows-Wheeler transform

SNPdetector: a software tool for sensitive and accurate SNP detection.

Sequencing technologies - the next generation

SOAP2: an improved ultrafast tool for short read alignment

Pyrobayes: an improved base caller for SNP discovery in pyrosequences.

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10.1101/GR.111120.110

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3106326

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