Recombination rate and selection strength in HIV intra-patient evolution
about
Limits to the rate of adaptive substitution in sexual populationsGenetic draft and quasi-neutrality in large facultatively sexual populationsHIV epidemiology. The early spread and epidemic ignition of HIV-1 in human populationsViral quasispecies evolutionContribution of HIV-1 genomes that do not integrate to the basic reproductive ratio of the virus.Dynamics of HIV-1 quasispecies during antiviral treatment dissected using ultra-deep pyrosequencingStochastic simulations suggest that HIV-1 survives close to its error thresholdLoss and recovery of genetic diversity in adapting populations of HIVEvolutionary biology for the 21st century.Functional bottlenecks for generation of HIV-1 intersubtype Env recombinants.The role of recombination in the emergence of a complex and dynamic HIV epidemic.Evolutionary dynamics of HIV at multiple spatial and temporal scales.Coalescent Inference Using Serially Sampled, High-Throughput Sequencing Data from Intrahost HIV InfectionIn vivo mutation rates and the landscape of fitness costs of HIV-1.Within-Epitope Interactions Can Bias CTL Escape Estimation in Early HIV InfectionAccurate viral population assembly from ultra-deep sequencing data.Antiviral drug resistance as an adaptive processHow to infer relative fitness from a sample of genomic sequencesDaily sampling of an HIV-1 patient with slowly progressing disease displays persistence of multiple env subpopulations consistent with neutralityWhy do RNA viruses recombine?Estimating the strength of selective sweeps from deep population diversity data.Reduced evolutionary rates in HIV-1 reveal extensive latency periods among replicating lineagesThe rate of adaptation in large sexual populations with linear chromosomes.Comparison of the Mechanisms of Drug Resistance among HIV, Hepatitis B, and Hepatitis C.Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule.Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection.The Effect of Interference on the CD8(+) T Cell Escape Rates in HIV.A multiple-alignment based primer design algorithm for genetically highly variable DNA targetsInferring HIV Escape Rates from Multi-Locus Genotype Data.Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule.A framework including recombination for analyzing the dynamics of within-host HIV genetic diversity.Fifteen years later: hard and soft selection sweeps confirm a large population number for HIV in vivo.HIV-1 quasispecies delineation by tag linkage deep sequencingFitness costs and diversity of the cytotoxic T lymphocyte (CTL) response determine the rate of CTL escape during acute and chronic phases of HIV infectionEmergent neutrality in adaptive asexual evolutionLinking genetic and environmental factors in amphibian disease risk.Broad CTL Response in Early HIV Infection Drives Multiple Concurrent CTL EscapesCentral memory CD4+ T cells are preferential targets of double infection by HIV-1.Investigating the Consequences of Interference between Multiple CD8+ T Cell Escape Mutations in Early HIV Infection.Characterization of primary isolates of HIV type 1 CRF28_BF, CRF29_BF, and unique BF recombinants circulating in São Paulo, Brazil
P2860
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P2860
Recombination rate and selection strength in HIV intra-patient evolution
description
2010 nî lūn-bûn
@nan
2010 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
Recombination rate and selection strength in HIV intra-patient evolution
@ast
Recombination rate and selection strength in HIV intra-patient evolution
@en
Recombination rate and selection strength in HIV intra-patient evolution
@nl
type
label
Recombination rate and selection strength in HIV intra-patient evolution
@ast
Recombination rate and selection strength in HIV intra-patient evolution
@en
Recombination rate and selection strength in HIV intra-patient evolution
@nl
prefLabel
Recombination rate and selection strength in HIV intra-patient evolution
@ast
Recombination rate and selection strength in HIV intra-patient evolution
@en
Recombination rate and selection strength in HIV intra-patient evolution
@nl
P2860
P3181
P1476
Recombination rate and selection strength in HIV intra-patient evolution
@en
P2860
P304
P3181
P356
10.1371/JOURNAL.PCBI.1000660
P407
P577
2010-01-29T00:00:00Z