Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells - Wikidata - awgldk - TriplyDB

Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells

Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells

http://www.wikidata.org/entity/Q28478707

about

SyStemCell: a database populated with multiple levels of experimental data from stem cell differentiation research DNA methylation, early life environment, and health outcomes Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation New answers to old questions from genome-wide maps of DNA methylation in hematopoietic cells Cytosine modifications in neurodevelopment and diseases Unlocking epigenetic codes in neurogenesis Mechanism and function of oxidative reversal of DNA and RNA methylation Dynamic heterogeneity of DNA methylation and hydroxymethylation in embryonic stem cell populations captured by single-cell 3D high-content analysis Role of TET enzymes in DNA methylation, development, and cancer DNA methylation and hydroxymethylation in stem cells 5-Hydroxymethylcytosine: generation, fate, and genomic distribution Transgenerational effects of obesogens and the obesity epidemic Lead exposure induces changes in 5-hydroxymethylcytosine clusters in CpG islands in human embryonic stem cells and umbilical cord blood Epigenetic alterations induced by genotoxic occupational and environmental human chemical carcinogens: A systematic literature review Genome-wide loss of 5-hmC is a novel epigenetic feature of Huntington's disease Correlated 5-Hydroxymethylcytosine (5hmC) and Gene Expression Profiles Underpin Gene and Organ-Specific Epigenetic Regulation in Adult Mouse Brain and Liver Epigenetic regulation in the inner ear and its potential roles in development, protection, and regeneration.ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases Early-life stress links 5-hydroxymethylcytosine to anxiety-related behaviors Differential methylation analysis for BS-seq data under general experimental design.Array-based assay detects genome-wide 5-mC and 5-hmC in the brains of humans, non-human primates, and mice.Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells.Notch signaling genes: myogenic DNA hypomethylation and 5-hydroxymethylcytosine.CpG and Non-CpG Methylation in Epigenetic Gene Regulation and Brain Function Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine.5-hydroxymethylcytosine represses the activity of enhancers in embryonic stem cells: a new epigenetic signature for gene regulation Interrogating genomic and epigenomic data to understand prostate cancer Transcriptional and epigenetic control of T helper cell specification: molecular mechanisms underlying commitment and plasticity.Mapping recently identified nucleotide variants in the genome and transcriptome.Primordial germ cell specification: a context-dependent cellular differentiation event [corrected].Epigenetic regulation of pluripotency and differentiation Alteration in 5-hydroxymethylcytosine-mediated epigenetic regulation leads to Purkinje cell vulnerability in ATM deficiency.Epigenetic events determine tissue-specific toxicity of inhalational exposure to the genotoxic chemical 1,3-butadiene in male C57BL/6J mice Transgenerational inheritance of prenatal obesogen exposure.Genome-wide antagonism between 5-hydroxymethylcytosine and DNA methylation in the adult mouse brain.TET proteins and the control of cytosine demethylation in cancer.DNA cytosine methylation and hydroxymethylation at the borders Transcription factor occupancy can mediate active turnover of DNA methylation at regulatory regions.Application of a low cost array-based technique - TAB-Array - for quantifying and mapping both 5mC and 5hmC at single base resolution in human pluripotent stem cells.Hydroxymethylation of DNA: an epigenetic marker.

P2860

Q21134856-1F1D2CB3-C989-4091-896C-4C00CC3A1795 Q26783146-99296551-08FD-4209-A8F8-05849E39D9AA Q26823896-71853FA0-6323-4BAF-BFD9-D837D785759F Q26851510-3F9C724A-3D44-4DDE-9B5D-A1AF0643161A Q26852087-682FFB05-7699-4DE4-8F2F-141197E770DD Q26998460-E9EC26FD-C1E0-463B-B1CE-0C7DB954B6A5 Q27002361-B0EC8186-20BD-48F8-B5C5-E19872251AFB Q27302797-8182EDC2-73CE-4D48-9C53-9ACA5E369431 Q28068541-5326DF3D-F645-4906-A123-59A5DBD8C8C5 Q28081499-81FEA30D-A608-4CB2-979B-84B4147A71E1 Q28287277-7E1064BF-F36E-4FE7-BF24-4137DC7FBD9B Q28385988-DFD58562-1941-41A3-9BFC-F6714E5314DA Q28392345-2F0F9146-BBC9-44AC-85B5-00EB4930EBC1 Q28395420-FD216580-E986-4AF1-93FD-58E62935FC81 Q28594357-7D467C40-4AA4-4B77-8E8D-082341459828 Q28818158-60C27232-2B01-4DEE-B8FB-31212E44E56F Q30417109-510D2F13-27C9-4FCE-BF18-4F72857DD01E Q30801567-4BBB7F53-0E80-4726-B2DF-6437B6CAEC0F Q30846554-6B9A4958-9E53-4E09-91A7-3F5AAA53996C Q31040608-C500381A-6303-42DF-A72F-ABE0FDED6A39 Q31151560-2A38DD1C-61B3-4FA2-8F96-B21AAF1D3361 Q33742524-BB7B90CA-9F44-4E31-90BA-F0E18C2DE4FC Q33784595-FB948856-0B10-4515-8B56-5E340ECAC2A3 Q33836737-9E8A1A34-54C6-4BF9-9C76-A5F865EC04C1 Q34034581-0E3CB217-B739-4C33-9587-6B187AF629EF Q34045850-F6E2F3A0-AEDB-4D18-88D8-ABAD9D44CABA Q34125866-FC48A47E-670F-4EC3-92BC-81380F7FB964 Q34245251-E234845E-D6AB-42C6-8248-56F32D2EFA0A Q34310659-42D2C9F8-9483-4DB6-9523-16036E726F7C Q34436937-8F143563-7B4B-4C1C-A666-52E365129D49 Q34498966-8F2E6C39-C510-4406-A9B2-6709A23E6188 Q34499746-135A07E0-6619-4539-B343-F392C2BE3D1A Q34605996-F494B372-3289-4F3F-8F8E-AD6FC58F76AF Q34674521-18E11FC5-AEDB-487C-8CC0-C892B5240F97 Q34823984-EA2238A1-20C9-4D17-BF9A-92E6EC397C02 Q35021377-65EA87E7-FD82-4332-B1AA-141FC016BDDE Q35064419-4A39288B-3ABF-4D0D-A773-458BC464CF66 Q35075152-C69CF222-44B5-417E-BB54-D489D474C868 Q35125656-50A93077-2AB6-4276-982C-BD11D4AF52E8 Q35727573-1163DD2A-7C2C-4A0B-9420-1764ED7B590D

P2860

Integrating 5-hydroxymethylcytosine into the epigenomic landscape of human embryonic stem cells

http://www.wikidata.org/entity/Q28478707

description

2011 nî lūn-bûn

@nan

2011 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հունիսին հրատարակված գիտական հոդված

@hy

2011年の論文

@ja

2011年論文

@yue

2011年論文

@zh-hant

2011年論文

@zh-hk

2011年論文

@zh-mo

2011年論文

@zh-tw

2011年论文

@wuu

name

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@ast

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@en

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@nl

type

label

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@ast

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@en

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@nl

prefLabel

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@ast

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@en

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@nl

P1433

Q28478707-E7921F6A-0056-410C-8C60-3B93F0573860

P1476

Q28478707-DE9F08DF-31BC-4777-8E5E-284A62F3ACF3

P2093

Q28478707-063F3814-00D4-4903-8A7A-9E5EE7A5AD40

Q28478707-0F02D0B8-0145-4797-A978-F92F2C89DE7F

Q28478707-23122FDE-9530-4FCA-866E-D2F732210B8F

Q28478707-48FB9F32-9942-4C44-9A85-B5BC65E1C9AB

Q28478707-5F2EEA55-4294-4E31-829B-F82C39D90ECE

Q28478707-6F0B933A-5ED1-4DB8-892F-4A613D451F9B

Q28478707-8E56F1FA-FC0A-406F-9451-222F57489966

Q28478707-92D40639-5078-4A28-A75B-ACA70BCBC2E1

Q28478707-A751FD4E-492C-49E8-A2DF-132B79A99A75

Q28478707-C0AFC0B4-C924-46AC-AC3F-91C49635C556

P2860

Q28478707-0359C826-DAE9-42C8-90D4-43FA2ED1BA24

Q28478707-05E8176D-B417-43B4-9001-08981607B5AE

Q28478707-116DB88B-1E2A-4DC1-9BC4-BF84D8AB5E0B

Q28478707-126E2D8E-B96F-4A55-B05F-EEFB18F2EA72

Q28478707-1ADB4FD0-F286-4B8C-92EE-DCED03B8F6E9

Q28478707-26249790-3319-47F3-B512-0DEC2D7CF6EA

Q28478707-3C8A773B-765E-4FC5-AC57-973AE5D82005

Q28478707-4054F3B7-E71D-4E1D-859F-5F9C0B9D6321

Q28478707-4E76BD56-74D2-4EF7-8BD1-060EAD78030F

Q28478707-54F27C45-B327-4DF1-944A-CD4AF11F9E1A

P304

Q28478707-925F167E-85D4-4164-94BE-1832A2747B37

P31

Q28478707-F083C930-221D-46BC-84E4-D3E598A5C538

P3181

Q28478707-AB95FB24-588C-40AF-A740-2EAD49555CA7

P356

Q28478707-F309F9B9-F513-47C9-9BA2-A82192C5572E

P407

Q28478707-0C680715-310C-45D3-84CE-171660640910

P433

Q28478707-4244610E-2E3A-47F0-B8C0-B8C2C4A8F17A

P478

Q28478707-46CEEF4A-1516-4190-AE62-FB7ED8EA6D78

P50

Q28478707-63D8CB9D-139C-481A-8D38-CDFA905EB577

P577

Q28478707-4A3EA04C-0120-45F2-AA6C-D6433C93790C

P5875

Q28478707-3A9D33BF-A2C7-4824-A8A1-DBDF12A4F35C

P698

Q28478707-AF4B8ADC-1084-4AB9-A469-B61208DEE27C

P932

Q28478707-EF0C346D-0802-4467-891B-AC2ECBA2CDD0

P3181

P356

JOURNAL.PGEN.1002154

P1433

P1476

Integrating 5-hydroxymethylcyt ...... of human embryonic stem cells

@en

P2093

Bing Ren

http://www.w3.org/2001/XMLSchema#string

Chuan He

http://www.w3.org/2001/XMLSchema#string

Ji Woong Han

http://www.w3.org/2001/XMLSchema#string

Julie J Kim

http://www.w3.org/2001/XMLSchema#string

Karen Hermetz

http://www.w3.org/2001/XMLSchema#string

Keith E Szulwach

http://www.w3.org/2001/XMLSchema#string

M Katharine Rudd

http://www.w3.org/2001/XMLSchema#string

Peng Jin

http://www.w3.org/2001/XMLSchema#string

Sandeep Namburi

http://www.w3.org/2001/XMLSchema#string

SangSung Kim

http://www.w3.org/2001/XMLSchema#string

P2860

Model-based analysis of ChIP-Seq (MACS)

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Human DNA methylomes at base resolution show widespread epigenomic differences

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

P304

e1002154

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P3181

1470137

http://www.w3.org/2001/XMLSchema#string

P356

10.1371/JOURNAL.PGEN.1002154

http://www.w3.org/2001/XMLSchema#string

P407

P433

6

http://www.w3.org/2001/XMLSchema#string

P478

7

http://www.w3.org/2001/XMLSchema#string

P50

P577

2011-06-23T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

51469546

http://www.w3.org/2001/XMLSchema#string

P698

21731508

http://www.w3.org/2001/XMLSchema#string

P932

3121778

http://www.w3.org/2001/XMLSchema#string