Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics - Wikidata - awgldk - TriplyDB

Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics

Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics

http://www.wikidata.org/entity/Q28646890

about

Exploring the potential of public proteomics data Interrogating the Plasmodium Sporozoite Surface: Identification of Surface-Exposed Proteins and Demonstration of Glycosylation on CSP and TRAP by Mass Spectrometry-Based Proteomics Cardiovascular proteomics in the era of big data: experimental and computational advances Microbial bioinformatics for food safety and production Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome 2016 update of the PRIDE database and its related tools An Open Data Format for Visualization and Analysis of Cross-Linked Mass Spectrometry Results.An evolving computational platform for biological mass spectrometry: workflows, statistics and data mining with MASSyPup64 Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0.Advanced Multidimensional Separations in Mass Spectrometry: Navigating the Big Data Deluge.Proteomic Data Storage and Sharing.Decreased Gap Width in a Cylindrical High-Field Asymmetric Waveform Ion Mobility Spectrometry Device Improves Protein Discovery.An integrated transcriptomics-guided genome-wide promoter analysis and next-generation proteomics approach to mine factor(s) regulating cellular differentiation.The 5300-year-old Helicobacter pylori genome of the Iceman.The mzqLibrary--An open source Java library supporting the HUPO-PSI quantitative proteomics standard.A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline.An intelligentized strategy for endogenous small molecules characterization and quality evaluation of earthworm from two geographic origins by ultra-high performance HILIC/QTOF MS(E) and Progenesis QI.Identification of B6T173 (ZmPrx35) as the prevailing peroxidase in highly insect-resistant maize (Zea mays, p84C3) kernels by activity-directed purification.Quantitative Proteomics Based on Optimized Data-Independent Acquisition in Plasma Analysis.Mass Spectrometry Based Molecular 3D-Cartography of Plant Metabolites.A comprehensive Candida albicans PeptideAtlas build enables deep proteome coverage.Spectral library-based glycopeptide analysis-detection of circulating galectin-3 binding protein in pancreatic cancer.State of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet Active site specificity profiling datasets of matrix metalloproteinases (MMPs) 1, 2, 3, 7, 8, 9, 12, 13 and 14.The Pig PeptideAtlas: A resource for systems biology in animal production and biomedicine.Metrics for the Human Proteome Project 2016: Progress on Identifying and Characterizing the Human Proteome, Including Post-Translational Modifications.Mass Spectrometry Analysis of Lysine Posttranslational Modifications of Tau Protein from Alzheimer's Disease Brain.Critical decisions in metaproteomics: achieving high confidence protein annotations in a sea of unknowns TAILS N-terminomic and proteomic datasets of healthy human dental pulp.multiplierz v2.0: A Python-based ecosystem for shared access and analysis of native mass spectrometry data.Identification of Highly Expressed Plasmodium Vivax Proteins from Clinical Isolates Using Proteomics.The Skyline ecosystem: Informatics for quantitative mass spectrometry proteomics.Proteogenomics: Key Driver for Clinical Discovery and Personalized Medicine.The PeptideAtlas of the Domestic Laying Hen.Profiling of Protein N-Termini and Their Modifications in Complex Samples.Proteotypic Peptides and Their Applications.Proteogenomic analysis of the total and surface-exposed proteomes of Plasmodium vivax salivary gland sporozoites.Comparative genomic analysis of Pseudomonas aeruginosa phage PaMx25 reveals a novel siphovirus group related to phages infecting hosts of different taxonomic classes.Disrupting glutamine metabolic pathways to sensitize gemcitabine-resistant pancreatic cancer.The Human Odontoblast Cell Layer and Dental Pulp Proteomes and N-Terminomes.

P2860

Q26785886-85B8956F-60F0-41CA-B895-007C8ED0E9CE Q27973871-30A81D89-A3EE-460E-9525-CAD2B3C3212F Q28074789-C12C5FDF-2AD2-4D29-9DE1-B749E3CE3AFE Q28081332-1499A4BA-1BBF-4F86-93A3-EC212F3209C5 Q28468274-40E996EC-0E86-4A14-AC06-4FEA3EEB366D Q28603110-558901D4-B193-497E-B08D-627140942FFB Q30489626-E7814B2E-DF26-447F-ADF8-6617D57D058E Q31029234-83E6EC5C-DB29-4575-AEAE-D95505B25CDA Q31031694-594ECB81-1C84-4F0C-8DF9-FA60587F48C2 Q31108309-E26C19DF-A3E2-41F7-9A74-7BAAE282BE61 Q31148956-2CF00F9F-24F1-47EF-ACA7-37F1B50E257B Q33466533-6BB43544-0A24-40BF-8D02-8E991A995F74 Q33581704-2D11A417-4C3F-4846-B21D-1EF8C3329AE1 Q34508052-684DF9C2-F0FC-4D02-ABA9-DF246650724F Q35650544-5765B0E3-1D36-42A9-8DA6-3FF2FF4E9AEB Q35918767-D1BA1DF7-925F-4AA3-83A5-9A5FB81F1C5F Q35983036-FBB5D983-59E3-4A20-A6D7-3273F9559958 Q36006956-C15604E5-5E38-40D6-BBBE-720A67C3414E Q36229203-1A302826-5ED0-4682-B24F-EE8A35D86402 Q36345409-92D8C5BE-3AEA-456F-9524-CDC7D23F4D19 Q36349011-99C1E7CD-C85F-406E-9235-6424D29C847D Q36408948-1BE7AECF-D067-4756-9BE7-16E84B4A2214 Q36584704-14D51609-5E99-438E-90AC-BA3ED22D185A Q36650775-7BF8F847-1EB5-4725-9705-2AA2F4475EF3 Q36674401-2FC02D74-BC11-46C2-A741-422D01FD2556 Q37456757-F350526A-DF46-4DFF-902B-465D1CFD2A02 Q37572010-0F002793-13A2-4D69-AB54-F1A2E4DE07F7 Q37610057-7B66701E-3867-4707-B65E-38A13CC9C7DD Q38399639-417BD3DA-7903-4000-BB0F-EF639F295185 Q38430038-22BCBAF9-6D99-4D4A-9071-704F7FA58A67 Q38608366-DEAF2DA4-DAA5-4EC3-83EA-E4ABFE8F1922 Q38686995-FF7570A7-FAEE-4B55-B89C-D306B26FA40A Q38743141-9671C420-7478-4370-9911-0F1D3ED2641B Q38760824-392CE40E-C29D-4D54-B78D-C7DD4C0AEB45 Q38896688-854AFF67-2311-4083-ADEB-EB56D7C631DC Q39099800-D9EF7D15-410E-4D7F-9475-E9886135A80D Q39501630-D84B3BD5-CFC7-466B-B6DC-9CE9F45A8525 Q40219480-9DB1D45A-C671-4793-AF8B-C5D748EBB286 Q41366826-C01209AD-6393-4047-8E70-78A3AA00030D Q47648309-88FC2821-5404-43E0-B937-A8A6DE4CD579

P2860

Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics

http://www.wikidata.org/entity/Q28646890

description

2015 nî lūn-bûn

@nan

2015 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2015 թվականի օգոստոսին հրատարակված գիտական հոդված

@hy

2015年の論文

@ja

2015年論文

@yue

2015年論文

@zh-hant

2015年論文

@zh-hk

2015年論文

@zh-mo

2015年論文

@zh-tw

2015年论文

@wuu

name

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@ast

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@en

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@nl

type

label

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@ast

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@en

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@nl

prefLabel

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@ast

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@en

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@nl

P1433

Q28646890-7B6C15F1-23AC-487B-B12F-56705A29E290

P1476

Q28646890-3AE0CD16-5427-43AC-A7E2-2427AC0CFAAF

P2093

Q28646890-2AEC13EE-0F05-4222-BB9B-57FE7A4989F3

Q28646890-74E22CC6-1C98-49DB-8D99-A473EDDCA9D6

Q28646890-CF3E1B14-5BD9-4ADB-9ED4-F608F793A68B

Q28646890-EACEBDB2-9D28-44CD-A928-C3C85DE0B16F

Q28646890-F8A50476-3FC0-438A-8580-B87899734922

P2860

Q28646890-12D3B5F8-6396-475C-8EC1-3B9EBAEC8DDF

Q28646890-14055CC0-7BD9-44B3-BBFD-4D85CD4E2E49

Q28646890-1D445396-D9A4-46F0-9CDA-FC0BE7B70410

Q28646890-25D1B201-1CD4-4803-82B9-E4EE4BB2B9BC

Q28646890-2734B1F3-B881-455C-B074-7EA09830826B

Q28646890-36FDAA2E-F90B-4557-95A4-9D1AD820653A

Q28646890-46F1A337-9105-4F2D-B341-4D7FDD02C4EE

Q28646890-496BC3D3-A852-4363-BC54-47E3C9D93F01

Q28646890-5048B9B9-551B-45D1-89E3-E5A122320906

Q28646890-5099E502-2213-4BF2-9CC2-7294EFAF332B

P304

Q28646890-676FA7E6-82DB-4277-AC07-E83111D0EB56

P31

Q28646890-72B1FB66-4F25-4A8F-A5EB-02D3A19974F0

P356

Q28646890-5F3CF472-4B54-46F6-9461-579D13DB4B64

P407

Q28646890-503F6E54-E42F-4AE9-92E7-836EC10C8F9B

P433

Q28646890-AB8642EE-A8E9-4FE2-8864-D1F43C2E3131

P478

Q28646890-8626C7C3-749F-432D-93B2-EBF549A7EB3D

P50

Q28646890-07C0C39D-91BA-43FE-A713-CC1723F700B6

P577

Q28646890-2EF11061-2762-45CE-9FB0-00E34C277E64

P698

Q28646890-AC2297F5-F9B6-4C5E-91D3-E278E4CA2FFB

P921

Q28646890-8F8C9258-2CD1-4205-9416-8709FF783047

Q28646890-B25ED126-FE34-4803-BBE9-020DBA44B771

P932

Q28646890-5EBD6A39-7C98-4388-ADDC-E3DDC1029775

P356

P1433

Proteomics - Clinical Applications

P1476

Trans-Proteomic Pipeline, a st ...... ducible proteomics informatics

@en

P2093

David Shteynberg

http://www.w3.org/2001/XMLSchema#string

Joseph Slagel

http://www.w3.org/2001/XMLSchema#string

Luis Mendoza

http://www.w3.org/2001/XMLSchema#string

Robert L Moritz

http://www.w3.org/2001/XMLSchema#string

Zhi Sun

http://www.w3.org/2001/XMLSchema#string

P2860

The effect of using an inappropriate protein database for proteomic data analysis

Gene ontology: tool for the unification of biology

UniProt: the Universal Protein knowledgebase

A cross-platform toolkit for mass spectrometry and proteomics

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

A statistical model for identifying proteins by tandem mass spectrometry

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

Proteogenomic characterization of human colon and rectal cancer

Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry

P304

745-54

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1002/PRCA.201400164

http://www.w3.org/2001/XMLSchema#string

P407

P433

7-8

http://www.w3.org/2001/XMLSchema#string

P478

9

http://www.w3.org/2001/XMLSchema#string

P50

P577

2015-08-01T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P698

25631240

http://www.w3.org/2001/XMLSchema#string

P921

reproducibility

clinical chemistry

P932

4506239

http://www.w3.org/2001/XMLSchema#string