The gene normalization task in BioCreative III - Wikidata - awgldk - TriplyDB

The gene normalization task in BioCreative III

The gene normalization task in BioCreative III

http://www.wikidata.org/entity/Q28732300

about

Crowdsourcing in biomedicine: challenges and opportunities GNormPlus: An Integrative Approach for Tagging Genes, Gene Families, and Protein Domains tmChem: a high performance approach for chemical named entity recognition and normalization Improving links between literature and biological data with text mining: a case study with GEO, PDB and MEDLINE Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications Quantifying the impact and extent of undocumented biomedical synonymy Generalising semantic category disambiguation with large lexical resources for fun and profit NCBI disease corpus: a resource for disease name recognition and concept normalization Collective instance-level gene normalization on the IGN corpus Biocuration workflows and text mining: overview of the BioCreative 2012 Workshop Track II SR4GN: a species recognition software tool for gene normalization Mining chemical patents with an ensemble of open systems EXTRACT: interactive extraction of environment metadata and term suggestion for metagenomic sample annotation The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text Community challenges in biomedical text mining over 10 years: success, failure and the future.Large-scale event extraction from literature with multi-level gene normalization.Accessing biomedical literature in the current information landscape.Combining heterogeneous data sources for accurate functional annotation of proteins.Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources BELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences.tmBioC: improving interoperability of text-mining tools with BioC.Overview of the gene ontology task at BioCreative IV Overview of the BioCreative III Workshop.Hybrid curation of gene-mutation relations combining automated extraction and crowdsourcing Mining images in biomedical publications: Detection and analysis of gel diagrams.Accelerating literature curation with text-mining tools: a case study of using PubTator to curate genes in PubMed abstracts.NOBLE - Flexible concept recognition for large-scale biomedical natural language processing Application of text-mining for updating protein post-translational modification annotation in UniProtKB tmVar: a text mining approach for extracting sequence variants in biomedical literature.GeneRIF indexing: sentence selection based on machine learning.A modular framework for biomedical concept recognition A document processing pipeline for annotating chemical entities in scientific documents tagtog: interactive and text-mining-assisted annotation of gene mentions in PLOS full-text articles Scaling drug indication curation through crowdsourcing.pGenN, a gene normalization tool for plant genes and proteins in scientific literature.Using ODIN for a PharmGKB revalidation experiment.Open semantic annotation of scientific publications using DOMEO.SimConcept: a hybrid approach for simplifying composite named entities in biomedical text Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations.Mapping Phenotypic Information in Heterogeneous Textual Sources to a Domain-Specific Terminological Resource

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P2860

The gene normalization task in BioCreative III

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2011 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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2011 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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The gene normalization task in BioCreative III

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Cheng-Ju Kuo

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Chih-Hsuan Wei

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Chun-Nan Hsu

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Han-Cheol Cho

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Hong-Jie Dai

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Hongfang Liu

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Hung-Yu Kao

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Illes Solt

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Jingchen Liu

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P2860

Gene ontology: tool for the unification of biology

Overview of BioCreAtIvE task 1B: normalized gene lists

Data preparation and interannotator agreement: BioCreAtIvE task 1B

OntoGene in BioCreative II

The Unified Medical Language System (UMLS) of the National Library of Medicine.

ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text.

BANNER: an executable survey of advances in biomedical named entity recognition.

LINNAEUS: a species name identification system for biomedical literature.

Integrating text mining into the MGI biocuration workflow

Disambiguating the species of biomedical named entities using natural language parsers.

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Suppl 8

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12 Suppl 8

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Dina Vishnyakova

Richard Tzong-Han Tsai

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