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Probing the SELEX process with next-generation sequencing

Probing the SELEX process with next-generation sequencing

http://www.wikidata.org/entity/Q28740666

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Applications of High-Throughput Sequencing for In Vitro Selection and Characterization of Aptamers Opportunities in the design and application of RNA for gene expression control Aptamers in analytics.PHASTpep: Analysis Software for Discovery of Cell-Selective Peptides via Phage Display and Next-Generation Sequencing.RNA Aptamer That Specifically Binds to Mycolactone and Serves as a Diagnostic Tool for Diagnosis of Buruli Ulcer Galaxy Workflows for Web-based Bioinformatics Analysis of Aptamer High-throughput Sequencing Data Cell-SELEX Identifies a "Sticky" RNA Aptamer Sequence.Analyzing HT-SELEX data with the Galaxy Project tools--A web based bioinformatics platform for biomedical research.A novel approach for transcription factor analysis using SELEX with high-throughput sequencing (TFAST).The centrality of RNA for engineering gene expression Rapid identification of cell-specific, internalizing RNA aptamers with bioinformatics analyses of a cell-based aptamer selection New Technologies Provide Quantum Changes in the Scale, Speed, and Success of SELEX Methods and Aptamer Characterization.Amplification and re-generation of LNA-modified libraries.Aptamers: versatile probes for flow cytometry.Next-generation sequencing reveals how RNA catalysts evolve from random space.Quantitative selection and parallel characterization of aptamers.RAPID-SELEX for RNA aptamers FASTAptamer: A Bioinformatic Toolkit for High-throughput Sequence Analysis of Combinatorial Selections.A simple method for eliminating fixed-region interference of aptamer binding during SELEX.Support vector machine classification of streptavidin-binding aptamers.A method for selecting structure-switching aptamers applied to a colorimetric gold nanoparticle assay Selection of LNA-containing DNA aptamers against recombinant human CD73.Hi-Fi SELEX: A High-Fidelity Digital-PCR Based Therapeutic Aptamer Discovery Platform.High-throughput assay and engineering of self-cleaving ribozymes by sequencing.Large scale analysis of the mutational landscape in HT-SELEX improves aptamer discovery Generation of a pair of independently binding DNA aptamers in a single round of selection using proximity ligation.Characterisation of aptamer-target interactions by branched selection and high-throughput sequencing of SELEX pools.Aptamers: current challenges and future prospects.Selection of DNA aptamers for ovarian cancer biomarker HE4 using CE-SELEX and high-throughput sequencing Highly Multiplexed RNA Aptamer Selection using a Microplate-based Microcolumn Device.Recurrent RNA motifs as scaffolds for genetically encodable small-molecule biosensors Aptamer Selection Technology and Recent Advances.Evidence classification of high-throughput protocols and confidence integration in RegulonDB.Integrated Microfluidic Isolation of Aptamers Using Electrophoretic Oligonucleotide Manipulation.Selection of a Novel Aptamer Against Vitronectin Using Capillary Electrophoresis and Next Generation Sequencing.Identification and Characterization of an eIF4e DNA Aptamer That Inhibits Proliferation With High Throughput Sequencing.Broccoli: rapid selection of an RNA mimic of green fluorescent protein by fluorescence-based selection and directed evolution.Tunable stringency aptamer selection and gold nanoparticle assay for detection of cortisol.Simultaneous improvement of specificity and affinity of aptamers against Streptococcus mutans by in silico maturation for biosensor development.Deciphering the protein-RNA recognition code: combining large-scale quantitative methods with structural biology.

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Probing the SELEX process with next-generation sequencing

http://www.wikidata.org/entity/Q28740666

description

2011 nî lūn-bûn

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2011 թուականին հրատարակուած գիտական յօդուած

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2011 թվականին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Probing the SELEX process with next-generation sequencing

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Probing the SELEX process with next-generation sequencing

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Probing the SELEX process with next-generation sequencing

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type

label

Probing the SELEX process with next-generation sequencing

@ast

Probing the SELEX process with next-generation sequencing

@en

Probing the SELEX process with next-generation sequencing

@nl

prefLabel

Probing the SELEX process with next-generation sequencing

@ast

Probing the SELEX process with next-generation sequencing

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Probing the SELEX process with next-generation sequencing

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JOURNAL.PONE.0029604

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Probing the SELEX process with next-generation sequencing

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Barbara Wilhelm

http://www.w3.org/2001/XMLSchema#string

Franziska Peter

http://www.w3.org/2001/XMLSchema#string

Hannsjörg Braun

http://www.w3.org/2001/XMLSchema#string

Nicole Greiner

http://www.w3.org/2001/XMLSchema#string

Tatjana Schütze

http://www.w3.org/2001/XMLSchema#string

Volker A Erdmann

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P2860

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase

In vitro selection of RNA molecules that bind specific ligands

Repeated sequences in DNA. Hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms

In vitro selection of functional nucleic acid sequences.

A calibrated diversity assay for nucleic acid libraries using DiStRO--a Diversity Standard of Random Oligonucleotides.

Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX

Next-generation phage display: integrating and comparing available molecular tools to enable cost-effective high-throughput analysis.

Automation in the high-throughput selection of random combinatorial libraries--different approaches for select applications.

Nucleic acid evolution and minimization by nonhomologous random recombination.

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e29604

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scholarly article

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1409163

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10.1371/JOURNAL.PONE.0029604

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P407

P433

12

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6

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Zoltán Konthur

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2011-12-29T00:00:00Z

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221744813

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22242135

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3248438

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