Data growth and its impact on the SCOP database: new developments - Wikidata - awgldk - TriplyDB

Data growth and its impact on the SCOP database: new developments

Data growth and its impact on the SCOP database: new developments

http://www.wikidata.org/entity/Q29619285

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Pre-calculated protein structure alignments at the RCSB PDB website Exploration of uncharted regions of the protein universe Non-homologous isofunctional enzymes: a systematic analysis of alternative solutions in enzyme evolution.Giant viruses coexisted with the cellular ancestors and represent a distinct supergroup along with superkingdoms Archaea, Bacteria and Eukarya Ribosomal history reveals origins of modern protein synthesis dcGOR: an R package for analysing ontologies and protein domain annotations Evolutionarily consistent families in SCOP: sequence, structure and function A large-scale structural classification of antimicrobial peptides SCOP2 prototype: a new approach to protein structure mining Classification of intrinsically disordered regions and proteins On universal common ancestry, sequence similarity, and phylogenetic structure: the sins of P-values and the virtues of Bayesian evidence Theobald reply The InterPro protein families database: the classification resource after 15 years Template-based protein structure modeling How significant is a protein structure similarity with TM-score = 0.5?The eisosome core is composed of BAR domain proteins.The proteomic complexity and rise of the primordial ancestor of diversified life BISC: binary subcomplexes in proteins database DAnCER: disease-annotated chromatin epigenetics resource BSDB: the biomolecule stretching database TMPad: an integrated structural database for helix-packing folds in transmembrane proteins PolyQ: a database describing the sequence and domain context of polyglutamine repeats in proteins SAHG, a comprehensive database of predicted structures of all human proteins The RCSB Protein Data Bank: redesigned web site and web services MetaBase--the wiki-database of biological databases Further evidence for the likely completeness of the library of solved single domain protein structures Structural classification of proteins and structural genomics: new insights into protein folding and evolution The Gene Wiki: community intelligence applied to human gene annotation ACLAME: a CLAssification of Mobile genetic Elements, update 2010 The Pfam protein families database CDD: specific functional annotation with the Conserved Domain Database The archiving and dissemination of biological structure data SUPERFAMILY--sophisticated comparative genomics, data mining, visualization and phylogeny Diversity in protein domain superfamilies The history of the CATH structural classification of protein domains Archaea: the first domain of diversified life The ensemble nature of allostery Urzymology: experimental access to a key transition in the appearance of enzymes Evolution of cytochrome bc complexes: from membrane-anchored dehydrogenases of ancient bacteria to triggers of apoptosis in vertebrates The use of evolutionary patterns in protein annotation

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Data growth and its impact on the SCOP database: new developments

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2008 nî lūn-bûn

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2008 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2008 թվականի հունվարին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年论文

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Data growth and its impact on the SCOP database: new developments

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Data growth and its impact on the SCOP database: new developments

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Data growth and its impact on the SCOP database: new developments

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Nucleic Acids Research

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Data growth and its impact on the SCOP database: new developments

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Andreeva A

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Chandonia JM

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Howorth D

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P2860

SISYPHUS--structural alignments for proteins with non-trivial relationships

The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families

The Protein Data Bank

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Pfam: clans, web tools and services

SCOP: a structural classification of proteins database for the investigation of sequences and structures

The impact of structural genomics: expectations and outcomes

SCOP database in 2004: refinements integrate structure and sequence family data

The ASTRAL Compendium in 2004

Growth of novel protein structural data.

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1984995

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10.1093/NAR/GKM993

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Database issue

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36

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Alexey G. Murzin

Steven E. Brenner

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2008-01-01T00:00:00Z

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