about
Vaxign: the first web-based vaccine design program for reverse vaccinology and applications for vaccine developmentUpdates on the web-based VIOLIN vaccine database and analysis systemProtegen: a web-based protective antigen database and analysis systemVIOLIN: vaccine investigation and online information networkOntology-supported research on vaccine efficacy, safety and integrative biological networksModeling biomedical experimental processes with OBIThe Ontology for Biomedical InvestigationsThe Ontology of Biological and Clinical Statistics (OBCS) for standardized and reproducible statistical analysisCommunity-based Ontology Development, Annotation and Discussion with MediaWiki extension Ontokiwi and Ontokiwi-based OntobediaCLO: The cell line ontologyThe ontology of genetic susceptibility factors (OGSF) and its application in modeling genetic susceptibility to vaccine adverse eventsVaccine adjuvant informatics: from data integration and analysis to rational vaccine adjuvant design.DNAVaxDB: the first web-based DNA vaccine database and its data analysis.Vaxvec: The first web-based recombinant vaccine vector database and its data analysisCRCView: a web server for analyzing and visualizing microarray gene expression data using model-based clustering.miniTUBA: medical inference by network integration of temporal data using Bayesian analysis.PHIDIAS: a pathogen-host interaction data integration and analysis system.Molecular targets for rapid identification of Brucella spp.BBP: Brucella genome annotation with literature mining and curation.Caspase-2 mediated apoptotic and necrotic murine macrophage cell death induced by rough Brucella abortusBayesian network expansion identifies new ROS and biofilm regulators.Using epitope predictions to evaluate efficacy and population coverage of the Mtb72f vaccine for tuberculosis.Analysis of Individual Differences in Vaccine Pharmacovigilance Using VAERS Data and MedDRA System Organ Classes: A Use Case Study With Trivalent Influenza Vaccine.Complementation of Brucella abortus RB51 with a functional wboA gene results in O-antigen synthesis and enhanced vaccine efficacy but no change in rough phenotype and attenuation.OntoFox: web-based support for ontology reuseLiterature-based discovery of IFN-gamma and vaccine-mediated gene interaction networks.OAE: The Ontology of Adverse Events.Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network.Overexpression of protective antigen as a novel approach to enhance vaccine efficacy of Brucella abortus strain RB51Brucella abortus strain RB51 as a vector for heterologous protein expression and induction of specific Th1 type immune responses.Induction of specific cytotoxic lymphocytes in mice vaccinated with Brucella abortus RB51.Recombinant Ochrobactrum anthropi expressing Brucella abortus Cu,Zn superoxide dismutase protects mice against B. abortus infection only after switching of immune responses to Th1 typeBioinformatics analysis of Brucella vaccines and vaccine targets using VIOLINThe Ontology of Vaccine Adverse Events (OVAE) and its usage in representing and analyzing adverse events associated with US-licensed human vaccinesNetwork-based analysis of vaccine-related associations reveals consistent knowledge with the vaccine ontology.Caspase-2-dependent dendritic cell death, maturation, and priming of T cells in response to Brucella abortus infection.Ontology-based combinatorial comparative analysis of adverse events associated with killed and live influenza vaccines.Genome-wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinologyMeta-analysis of variables affecting mouse protection efficacy of whole organism Brucella vaccines and vaccine candidatesFinding our way through phenotypes.
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Yongqun He
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P2456
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P496
0000-0001-9189-9661