Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales. - Wikidata - awgldk - TriplyDB

Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales.

Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales.

http://www.wikidata.org/entity/Q30558064

about

The bee tree of life: a supermatrix approach to apoid phylogeny and biogeography Harnessing the power of RADseq for ecological and evolutionary genomics Genomic Tools in Pearl Millet Breeding for Drought Tolerance: Status and Prospects Targeted capture and resequencing of 1040 genes reveal environmentally driven functional variation in grey wolves Exploring the genetic basis of adaptation to high elevations in reptiles: a comparative transcriptome analysis of two toad-headed agamas (genus Phrynocephalus)Divergence with gene flow within the recent chipmunk radiation (Tamias)Revisiting the Zingiberales: using multiplexed exon capture to resolve ancient and recent phylogenetic splits in a charismatic plant lineage Computational Performance and Statistical Accuracy of *BEAST and Comparisons with Other Methods Genomic Mining of Phylogenetically Informative Nuclear Markers in Bark and Ambrosia Beetles Fixing Formalin: A Method to Recover Genomic-Scale DNA Sequence Data from Formalin-Fixed Museum Specimens Using High-Throughput Sequencing De novo transcriptomic analyses for non-model organisms: an evaluation of methods across a multi-species data set.Unlocking the vault: next-generation museum population genomics.Ecological genomics of local adaptation.Genomics and museum specimens.Recent novel approaches for population genomics data analysis.Using genomics to characterize evolutionary potential for conservation of wild populations Scrimer: designing primers from transcriptome data.EAPhy: A Flexible Tool for High-throughput Quality Filtering of Exon-alignments and Data Processing for Phylogenetic Methods Targeted Capture Sequencing in Whitebark Pine Reveals Range-Wide Demographic and Adaptive Patterns Despite Challenges of a Large, Repetitive Genome RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data.ExCNVSS: A Noise-Robust Method for Copy Number Variation Detection in Whole Exome Sequencing Data.A method for extracting high-quality RNA from diverse plants for next-generation sequencing and gene expression analyses.Development, validation and high-throughput analysis of sequence markers in nonmodel species.Sequence capture using PCR-generated probes: a cost-effective method of targeted high-throughput sequencing for nonmodel organisms.Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus group scincid lizards Impact of enrichment conditions on cross-species capture of fresh and degraded DNA.Negligible nuclear introgression despite complete mitochondrial capture between two species of chipmunks.Exon capture phylogenomics: efficacy across scales of divergence.Sequence capture of ultraconserved elements from bird museum specimens.An Exon-Capture System for the Entire Class Ophiuroidea.Captured metagenomics: large-scale targeting of genes based on 'sequence capture' reveals functional diversity in soils.Phylogenomics at the tips: inferring lineages and their demographic history in a tropical lizard, Carlia amax.A Phylogenomic Approach Based on PCR Target Enrichment and High Throughput Sequencing: Resolving the Diversity within the South American Species of Bartsia L. (Orobanchaceae)BaitFisher: A Software Package for Multispecies Target DNA Enrichment Probe Design.Cryptic sex? Estimates of genome exchange in unisexual mole salamanders (Ambystoma sp.).Exon capture optimization in amphibians with large genomes.An evaluation of transcriptome-based exon capture for frog phylogenomics across multiple scales of divergence (Class: Amphibia, Order: Anura).Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics.Identification and qualification of 500 nuclear, single-copy, orthologous genes for the Eupulmonata (Gastropoda) using transcriptome sequencing and exon capture.Capturing Darwin's dream.

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Transcriptome-based exon capture enables highly cost-effective comparative genomic data collection at moderate evolutionary scales.

http://www.wikidata.org/entity/Q30558064

description

2012 nî lūn-bûn

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2012 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի օգոստոսին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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Transcriptome-based exon captu ...... moderate evolutionary scales.

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Transcriptome-based exon captu ...... moderate evolutionary scales.

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Transcriptome-based exon captu ...... moderate evolutionary scales.

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Transcriptome-based exon captu ...... moderate evolutionary scales.

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Transcriptome-based exon captu ...... moderate evolutionary scales.

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Transcriptome-based exon captu ...... moderate evolutionary scales.

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Craig Moritz

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Jeffrey M Good

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Ke Bi

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Sonal Singhal

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Tyler Linderoth

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P2860

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

Sequencing of 50 human exomes reveals adaptation to high altitude

Optimization of de novo transcriptome assembly from next-generation sequencing data

De novo assembly of human genomes with massively parallel short read sequencing

BLAT--the BLAST-like alignment tool

The Sequence Alignment/Map format and SAMtools

Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis

Phylogeny estimation of the radiation of western North American chipmunks (Tamias) in the face of introgression using reproductive protein genes

Targeted investigation of the Neandertal genome by array-based sequence capture

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