Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
about
The A, C, G, and T of Genome AssemblyDesign and computational analysis of single-cell RNA-sequencing experimentsIntegrative workflows for metagenomic analysisARTIST: high-resolution genome-wide assessment of fitness using transposon-insertion sequencingThe IL-4/STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3pThe genome, transcriptome, and proteome of the nematode Steinernema carpocapsae: evolutionary signatures of a pathogenic lifestyleAdapterRemoval v2: rapid adapter trimming, identification, and read mergingsPARTA: a parallelized pipeline for integrated analysis of plant miRNA and cleaved mRNA data sets, including new miRNA target-identification softwarePrevention, diagnosis and treatment of high-throughput sequencing data pathologies.Chimira: analysis of small RNA sequencing data and microRNA modificationsCRCDA--Comprehensive resources for cancer NGS data analysis.miRge - A Multiplexed Method of Processing Small RNA-Seq Data to Determine MicroRNA EntropyEvaluation of preprocessing, mapping and postprocessing algorithms for analyzing whole genome bisulfite sequencing data.Combining Shigella Tn-seq data with gold-standard E. coli gene deletion data suggests rare transitions between essential and non-essential gene functionality.DNApi: A De Novo Adapter Prediction Algorithm for Small RNA Sequencing Data.From next-generation resequencing reads to a high-quality variant data set.Quality control on the frontier.Whole genome sequencing reveals within-host genetic changes in paired meningococcal carriage isolates from Ethiopia.MiR-277/4989 regulate transcriptional landscape during juvenile to adult transition in the parasitic helminth Schistosoma mansoni.Single-cell RNA-sequencing of the brain.Cellular senescence drives age-dependent hepatic steatosis.Transposon-driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolutionThe histone chaperone CAF-1 safeguards somatic cell identity.Sequence tag-based analysis of microbial population dynamicsGenetic analysis of high bone mass cases from the BARCOS cohort of Spanish postmenopausal womenFlexible, fast and accurate sequence alignment profiling on GPGPU with PaSWAS.Accurate read-based metagenome characterization using a hierarchical suite of unique signatures.Prmt5 is a regulator of muscle stem cell expansion in adult mice.High-Throughput Profiling of Caenorhabditis elegans Starvation-Responsive microRNAs.DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts.Proteomic Characterization of Middle Ear Fluid Confirms Neutrophil Extracellular Traps as a Predominant Innate Immune Response in Chronic Otitis MediaTongue Coating and the Salivary Microbial Communities Vary in Children with HalitosisCodon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States.Improving microRNA target prediction with gene expression profiles.Illumina Sequencing Reveals Aberrant Expression of MicroRNAs and Their Variants in Whitefish (Coregonus lavaretus) Liver after Exposure to Microcystin-LR.Long non-coding RNAs are major contributors to transcriptome changes in sunflower meiocytes with different recombination ratesNormalization of human RNA-seq experiments using chimpanzee RNA as a spike-in standard.Whole-Genome Sequence Analysis Reveals the Enterovirus D68 Isolates during the United States 2014 Outbreak Mainly Belong to a Novel Clade.Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA WorkbenchComputational approaches for interpreting scRNA-seq data.
P2860
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P2860
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
description
2013 nî lūn-bûn
@nan
2013 թուականի Յունիսին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հունիսին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@ast
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@en
type
label
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@ast
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@en
prefLabel
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@ast
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@en
P2093
P2860
P1433
P1476
Kraken: a set of tools for quality control and analysis of high-throughput sequence data.
@en
P2093
Cei Abreu-Goodger
Matthew P A Davis
Nenad Bartonicek
Stijn van Dongen
P2860
P356
10.1016/J.YMETH.2013.06.027
P577
2013-06-29T00:00:00Z