Modeling of DNA microarray data by using physical properties of hybridization. - Wikidata - awgldk - TriplyDB

Modeling of DNA microarray data by using physical properties of hybridization.

Modeling of DNA microarray data by using physical properties of hybridization.

http://www.wikidata.org/entity/Q30803659

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Comparisons of substitution, insertion and deletion probes for resequencing and mutational analysis using oligonucleotide microarrays Genome-wide estimation of transcript concentrations from spotted cDNA microarray data.On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes.A multivariate prediction model for microarray cross-hybridization Comprehensive viral oligonucleotide probe design using conserved protein regions The effects of mismatches on hybridization in DNA microarrays: determination of nearest neighbor parameters Designing toxicogenomics studies that use DNA array technology BIOPHYSICAL PROPERTIES OF NUCLEIC ACIDS AT SURFACES RELEVANT TO MICROARRAY PERFORMANCE.Cell cycle-dependent nucleosome occupancy at cohesin binding sites in yeast chromosomes.Correction of scaling mismatches in oligonucleotide microarray data.A nitty-gritty aspect of correlation and network inference from gene expression data Mismatch and G-stack modulated probe signals on SNP microarrays.Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data.Variation of RNA Quality and Quantity Are Major Sources of Batch Effects in Microarray Expression Data.Statistical issues in the analysis of Illumina data.Specificity of DNA microarray hybridization: characterization, effectors and approaches for data correction.Microarray scanner calibration curves: characteristics and implications.Strong position-dependent effects of sequence mismatches on signal ratios measured using long oligonucleotide microarrays Position dependent mismatch discrimination on DNA microarrays - experiments and model.Microarray-based estimation of SNP allele-frequency in pooled DNA using the Langmuir kinetic model Thermodynamic scaling behavior in genechips.Inverse Langmuir method for oligonucleotide microarray analysis.G-stack modulated probe intensities on expression arrays - sequence corrections and signal calibration.Application of equilibrium models of solution hybridization to microarray design and analysis Nonparametric methods for the analysis of single-color pathogen microarrays.16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales"Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays.Beyond Affymetrix arrays: expanding the set of known hybridization isotherms and observing pre-wash signal intensities.Accurate estimates of microarray target concentration from a simple sequence-independent Langmuir model.Evaluating oligonucleotide properties for DNA microarray probe design.From hybridization theory to microarray data analysis: performance evaluation.Empirical comparison of cross-platform normalization methods for gene expression data Novel multi-nucleotide polymorphisms in the human genome characterized by whole genome and exome sequencing.Estimating RNA-quality using GeneChip microarrays.Modeling formamide denaturation of probe-target hybrids for improved microarray probe design in microbial diagnostics.Hybridization and amplification rate correction for affymetrix SNP arrays.Photo- and biophysical studies of lectin-conjugated fluorescent nanoparticles: reduced sensitivity in high density assays.Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications Mathematical tools to optimize the design of oligonucleotide probes and primers.Development of a physical model-based algorithm for the detection of single-nucleotide substitutions by using tiling microarrays.

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Modeling of DNA microarray data by using physical properties of hybridization.

http://www.wikidata.org/entity/Q30803659

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2003 nî lūn-bûn

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2003 թուականի Յունիսին հրատարակուած գիտական յօդուած

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2003 թվականի հունիսին հրատարակված գիտական հոդված

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2003年の論文

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2003年学术文章

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2003年学术文章

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2003年学术文章

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2003年学术文章

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2003年学术文章

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2003年學術文章

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Modeling of DNA microarray data by using physical properties of hybridization.

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Modeling of DNA microarray data by using physical properties of hybridization.

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Modeling of DNA microarray data by using physical properties of hybridization.

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Modeling of DNA microarray data by using physical properties of hybridization.

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Modeling of DNA microarray data by using physical properties of hybridization.

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Modeling of DNA microarray data by using physical properties of hybridization.

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P2860

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

Empirical characterization of the expression ratio noise structure in high-density oligonucleotide arrays.

Evaluation of normalization procedures for oligonucleotide array data based on spiked cRNA controls

Profound effect of normalization on detection of differentially expressed genes in oligonucleotide microarray data analysis.

Normalization and analysis of DNA microarray data by self-consistency and local regression.

Expression monitoring by hybridization to high-density oligonucleotide arrays

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

Exploring the new world of the genome with DNA microarrays

High density synthetic oligonucleotide arrays

Quantitative noise analysis for gene expression microarray experiments

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