HAMAP in 2015: updates to the protein family classification and annotation system
about
The SIB Swiss Institute of Bioinformatics' resources: focus on curated databasesAPRICOT: an integrated computational pipeline for the sequence-based identification and characterization of RNA-binding proteinsUniProt: a hub for protein informationProtein Bioinformatics Databases and Resources.Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis.Reannotation of Yersinia pestis Strain 91001 Based on Omics Data.Bacterial Virus Ontology; Coordinating across Databases.InterPro in 2017-beyond protein family and domain annotations.A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes.A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomesKiwifruit Information Resource (KIR): a comparative platform for kiwifruit genomics.RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond.SugarBindDB, a resource of glycan-mediated host-pathogen interactions.Functional Annotations of Paralogs: A Blessing and a CurseComputational prediction shines light on type III secretion origins.Large-scale inference of gene function through phylogenetic annotation of Gene Ontology terms: case study of the apoptosis and autophagy cellular processesUniProt: the universal protein knowledgebasePrimer on the Gene Ontology.UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKBGO annotation in InterPro: why stability does not indicate accuracy in a sea of changing annotations.BrEPS 2.0: Optimization of sequence pattern prediction for enzyme annotation.Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variationThe Classification of Protein Domains.The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis.The single cyclic nucleotide-specific phosphodiesterase of the intestinal parasite Giardia lamblia represents a potential drug target.Resources and tools for the high-throughput, multi-omic study of intestinal microbiota.Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria.Genomic assessment in Lactobacillus plantarum links the butyrogenic pathway with glutamine metabolism.The pomegranate (Punica granatum L.) genome and the genomics of punicalagin biosynthesis.Gene Phylogenies and Orthologous Groups.On expert curation and scalability: UniProtKB/Swiss-Prot as a case study.Identification of the Autochaperone Domain in the Type Va Secretion System (T5aSS): Prevalent Feature of Autotransporters with a β-Helical Passenger.Functional elucidation of hypothetical proteins for their indispensable roles toward drug designing targets from Helicobacter pylori strain HPAG1.Genetic Loci Governing Androgenic Capacity in Perennial Ryegrass (Lolium perenne L.).The 24th annual Nucleic Acids Research database issue: a look back and upcoming changes.
P2860
Q27968301-14A610A2-4ACB-4542-A3EA-CB9F7C931121Q28871814-C3FB4424-E593-4E6D-9AB5-D07CFF02F2B7Q29547457-9198A704-B86F-44E7-8521-4FB7A2C3D3A8Q30398117-FA5DF7D5-6B4C-40FB-9D87-F2F0DE20609AQ30402739-EBEB5441-2823-474F-B5DC-119C4AF38693Q31112747-D47F88DD-C4A8-4803-96A5-DA17D3C72103Q32183828-BA421AA7-A34A-4175-85F4-D7A5B1EAF0B3Q34546171-0DC3B348-2B8E-4597-9C33-940EE1F19C4EQ35845538-DA6A6FFD-3941-42C5-92DF-B1B154429FFDQ36065227-0C61AA5E-463E-44C0-ACDB-CBB13D017F95Q36207277-3227C770-E3AD-4876-9AF1-141279B30796Q36360496-18CB2606-1B72-4F5B-81BF-6B15E04E7ADCQ36434726-622FA021-BEB3-41DE-9EFD-264D762C041FQ36434892-8B83751D-B3EC-41E8-B5F9-B44D08447315Q37293854-2B4C6E63-7815-418C-BE4B-94FA73DD5641Q37319107-F0E84A29-C9E4-4434-81AA-F606D7C909DCQ37544701-4FD6FBF0-C0B9-4A07-95ED-72DA3DE991C9Q37556842-E326AFE5-10B7-4B31-9432-2E6C234D5F55Q38440704-DB3C63BA-B360-45CD-8CEB-30A504F7D339Q38447701-70BD6B97-99EC-4BD2-8DE5-CCA1635D5BAFQ38449657-AC60DA35-A887-4D71-AB0C-54AA32FD14D0Q38657445-C5043DDD-0A2E-4F8B-AAB8-2E269DE54792Q38674748-21C24F33-102C-4257-85BA-38BFE67ECE1EQ39146480-9CD0990D-34A2-4ECD-AFF6-DB714A0CE6B9Q39969726-6A636DBA-D71A-4FDC-9BF8-CAC17AEA6CD6Q40043823-BAD93CD5-4CBA-45F3-8034-E9B2ECE0C823Q46251995-1DA3A769-9ADA-40B8-864C-10DA53E66665Q47123789-3FC5C9FE-F753-447C-A59F-DB37DC43A4C3Q47141497-A8E1DFFB-1A6B-4D32-ACFD-8510523278B3Q47205634-7D3096C3-A379-425F-AFA7-753EF5D1B89FQ47254705-4E99ECCC-5E5F-4BFC-8390-F1551C27C3A5Q47313936-6C0C5D58-4037-42DB-8EF9-DE41C5668E0BQ49631240-57385591-04C6-49DA-B4AD-C919926B7CE2Q51104398-27324261-9B7E-47C8-8621-CF1E1B84DA30Q52329545-BB6D769E-B019-4B1F-BBA8-C4BE75AE850CQ53126060-E6287A99-72F1-4FCA-A63F-AD09A9B22554
P2860
HAMAP in 2015: updates to the protein family classification and annotation system
description
2014 nî lūn-bûn
@nan
2014 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2014年の論文
@ja
2014年論文
@yue
2014年論文
@zh-hant
2014年論文
@zh-hk
2014年論文
@zh-mo
2014年論文
@zh-tw
2014年论文
@wuu
name
HAMAP in 2015: updates to the protein family classification and annotation system
@ast
HAMAP in 2015: updates to the protein family classification and annotation system
@en
type
label
HAMAP in 2015: updates to the protein family classification and annotation system
@ast
HAMAP in 2015: updates to the protein family classification and annotation system
@en
prefLabel
HAMAP in 2015: updates to the protein family classification and annotation system
@ast
HAMAP in 2015: updates to the protein family classification and annotation system
@en
P2093
P2860
P50
P356
P1476
HAMAP in 2015: updates to the protein family classification and annotation system
@en
P2093
Andrea H Auchincloss
Béatrice A Cuche
Delphine Baratin
Guillaume Keller
P2860
P304
P356
10.1093/NAR/GKU1002
P407
P433
Database issue
P50
P577
2014-10-27T00:00:00Z