Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics.
about
QC metrics from CPTAC raw LC-MS/MS data interpreted through multivariate statisticsDIA-Umpire: comprehensive computational framework for data-independent acquisition proteomicsOpen MS/MS spectral library search to identify unanticipated post-translational modifications and increase spectral identification rate.SWATH2stats: An R/Bioconductor Package to Process and Convert Quantitative SWATH-MS Proteomics Data for Downstream Analysis Tools.Understanding the improved sensitivity of spectral library searching over sequence database searching in proteomics data analysis.Realistic artificial DNA sequences as negative controls for computational genomics.Spectrum-to-spectrum searching using a proteome-wide spectral libraryAn improved method for the construction of decoy peptide MS/MS spectra suitable for the accurate estimation of false discovery rates.Building and searching tandem mass spectral libraries for peptide identification.A semi-empirical approach for predicting unobserved peptide MS/MS spectra from spectral libraries.Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment.A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics.False discovery rates in spectral identificationExtending the coverage of spectral libraries: a neighbor-based approach to predicting intensities of peptide fragmentation spectra.Extensive mass spectrometry-based analysis of the fission yeast proteome: the Schizosaccharomyces pombe PeptideAtlas.Spectral library generating function for assessing spectrum-spectrum match significanceRefining similarity scoring to enable decoy-free validation in spectral library searching.Refining spectral library searching.Absolute quantification of microbial proteomes at different states by directed mass spectrometryA high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlasUnrestricted modification search reveals lysine methylation as major modification induced by tissue formalin fixation and paraffin embedding.Peptide identification by database search of mixture tandem mass spectraAn adaptive classification model for peptide identificationSpectral library searching in proteomics.Detection of busulfan adducts on proteins.Current challenges in software solutions for mass spectrometry-based quantitative proteomics.Large scale analysis of amino acid substitutions in bacterial proteomics.Visualizing and comparing results of different peptide identification methods.A novel algorithm for validating peptide identification from a shotgun proteomics search engineThe spectral networks paradigm in high throughput mass spectrometry.Current methods for global proteome identification.Dereplication, sequencing and identification of peptidic natural products: from genome mining to peptidogenomics to spectral networksTandem mass spectral libraries of peptides and their roles in proteomics research.Chronic intermittent alcohol disrupts the GluN2B-associated proteome and specifically regulates group I mGlu receptor-dependent long-term depression.Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics.A new SWATH ion library for mouse adult hippocampal neural stem cells.Fast Open Modification Spectral Library Searching through Approximate Nearest Neighbor Indexing
P2860
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P2860
Artificial decoy spectral libraries for false discovery rate estimation in spectral library searching in proteomics.
description
2010 nî lūn-bûn
@nan
2010 թուականի Յունուարին հրատարակուած գիտական յօդուած
@hyw
2010 թվականի հունվարին հրատարակված գիտական հոդված
@hy
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
name
Artificial decoy spectral libr ...... brary searching in proteomics.
@ast
Artificial decoy spectral libr ...... brary searching in proteomics.
@en
type
label
Artificial decoy spectral libr ...... brary searching in proteomics.
@ast
Artificial decoy spectral libr ...... brary searching in proteomics.
@en
prefLabel
Artificial decoy spectral libr ...... brary searching in proteomics.
@ast
Artificial decoy spectral libr ...... brary searching in proteomics.
@en
P50
P356
P1476
Artificial decoy spectral libr ...... brary searching in proteomics.
@en
P304
P356
10.1021/PR900947U
P577
2010-01-01T00:00:00Z