How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results - Wikidata - awgldk - TriplyDB

How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results

How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results

http://www.wikidata.org/entity/Q31034412

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Algorithm-driven artifacts in median polish summarization of microarray data Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte Cardiovascular genomics: a biomarker identification pipeline A Web-based and Grid-enabled dChip version for the analysis of large sets of gene expression data ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses A Four-Biomarker Blood Signature Discriminates Systemic Inflammation Due to Viral Infection Versus Other Etiologies.Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy.Accurate data processing improves the reliability of Affymetrix gene expression profiles from FFPE samples Comparison of gene expression microarray data with count-based RNA measurements informs microarray interpretation.Analysis of probe level patterns in Affymetrix microarray data.Phylogenetic modeling of heterogeneous gene-expression microarray data from cancerous specimens.Probe set algorithms: is there a rational best bet?AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data.Transcriptional profiling of C57 and DBA strains of mice in the absence and presence of morphine.Identification of a predictive gene expression signature of cervical lymph node metastasis in oral squamous cell carcinoma.A meta-analysis of kidney microarray datasets: investigation of cytokine gene detection and correlation with rt-PCR and detection thresholds Effects on linkage analyses of different Affymetrix expression measures as quantitative trait phenotypes.Comparative gene expression profiles between heterotic and non-heterotic hybrids of tetraploid Medicago sativa Analyzing gene expression data from microarray and next-generation dna sequencing transcriptome profiling assays using GeneSifter analysis edition.An oligo-based microarray offers novel transcriptomic approaches for the analysis of pathogen resistance and fruit quality traits in melon (Cucumis melo L.).Prioritizing genes for follow-up from genome wide association studies using information on gene expression in tissues relevant for type 2 diabetes mellitus Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements.SWISS MADE: Standardized WithIn Class Sum of Squares to evaluate methodologies and dataset elements.A robust method for estimating gene expression states using Affymetrix microarray probe level data Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates A Brassica exon array for whole-transcript gene expression profiling.Differential expression of decorin, EGFR and cyclin D1 during mammary gland carcinogenesis in TA2 mice with spontaneous breast cancer RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization.Downstream targets of HOXB4 in a cell line model of primitive hematopoietic progenitor cells Activation of MAPK in hearts of EMD null mice: similarities between mouse models of X-linked and autosomal dominant Emery Dreifuss muscular dystrophy.Stem cell-like gene expression in ovarian cancer predicts type II subtype and prognosis Experimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments.How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis.Genes and biochemical pathways in human skeletal muscle affecting resting energy expenditure and fuel partitioning Identification of the IGF1/PI3K/NF κB/ERK gene signalling networks associated with chemotherapy resistance and treatment response in high-grade serous epithelial ovarian cancer A revised design for microarray experiments to account for experimental noise and uncertainty of probe response Polymorphisms in predicted miRNA binding sites and osteoporosis.Peripheral blood monocyte-expressed ANXA2 gene is involved in pathogenesis of osteoporosis in humans Identification of the genetic basis for complex disorders by use of pooling-based genomewide single-nucleotide-polymorphism association studies Exon arrays provide accurate assessments of gene expression

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P2860

How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results

http://www.wikidata.org/entity/Q31034412

description

2006 nî lūn-bûn

@nan

2006 թուականի Մարտին հրատարակուած գիտական յօդուած

@hyw

2006 թվականի մարտին հրատարակված գիտական հոդված

@hy

2006年の論文

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2006年論文

@yue

2006年論文

@zh-hant

2006年論文

@zh-hk

2006年論文

@zh-mo

2006年論文

@zh-tw

2006年论文

@wuu

name

How to decide? Different metho ...... ta will give different results

@ast

How to decide? Different metho ...... ta will give different results

@en

type

label

How to decide? Different metho ...... ta will give different results

@ast

How to decide? Different metho ...... ta will give different results

@en

prefLabel

How to decide? Different metho ...... ta will give different results

@ast

How to decide? Different metho ...... ta will give different results

@en

P1433

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P2860

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1471-2105-7-137

P1433

BMC Bioinformatics

P1476

How to decide? Different metho ...... ta will give different results

@en

P2093

Anton J M Peeters

http://www.w3.org/2001/XMLSchema#string

Frank F Millenaar

http://www.w3.org/2001/XMLSchema#string

John Okyere

http://www.w3.org/2001/XMLSchema#string

Laurentius A C J Voesenek

http://www.w3.org/2001/XMLSchema#string

Martijn van Zanten

http://www.w3.org/2001/XMLSchema#string

P2860

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

Empirical characterization of the expression ratio noise structure in high-density oligonucleotide arrays.

Match-only integral distribution (MOID) algorithm for high-density oligonucleotide array analysis

Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Expression monitoring by hybridization to high-density oligonucleotide arrays

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

Summaries of Affymetrix GeneChip probe level data

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

P2888

1471-2105-7-137

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137

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scholarly article

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10.1186/1471-2105-7-137

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7

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2006-03-15T00:00:00Z

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7238395

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1021178486

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16539732

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1431565

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