DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches. - Wikidata - awgldk - TriplyDB

DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches.

DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches.

http://www.wikidata.org/entity/Q31037308

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Using next-generation sequencing to analyse the diet of a highly endangered land snail (Powelliphanta augusta) feeding on endemic earthworms Ancient and modern environmental DNA 18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species.DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet.Reconstructing a herbivore's diet using a novel rbcL DNA mini-barcode for plants.Bioinformatic challenges for DNA metabarcoding of plants and animals.The future of environmental DNA in ecology.Molecular- and pollen-based vegetation analysis in lake sediments from central Scandinavia.Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents Molecular studies neglect apparently gram-negative populations in the human gut microbiota.A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking probes.The Gut Microbiotassay: a high-throughput qPCR approach combinable with next generation sequencing to study gut microbial diversity.Adélie penguin population diet monitoring by analysis of food DNA in scats.From puffins to plankton: a DNA-based analysis of a seabird food chain in the northern Gulf of Maine.Use of length heterogeneity polymerase chain reaction (LH-PCR) as non-invasive approach for dietary analysis of Svalbard reindeer, Rangifer tarandus platyrhynchus Pyrosequencing of prey DNA in faeces of carnivorous land snails to facilitate ecological restoration and relocation programmes.Dining local: the microbial diet of a snail that grazes microbial communities is geographically structured.From benchtop to desktop: important considerations when designing amplicon sequencing workflows Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding.Yabi: An online research environment for grid, high performance and cloud computing.Quantitative DNA metabarcoding: improved estimates of species proportional biomass using correction factors derived from control material.The use of DNA barcodes in food web construction-terrestrial and aquatic ecologists unite!High diversity of picornaviruses in rats from different continents revealed by deep sequencing.Effect of marker choice and thermal cycling protocol on zooplankton DNA metabarcoding studies Metabarcoding avian diets at airports: implications for birdstrike hazard management planning.Using environmental DNA to census marine fishes in a large mesocosm.DNA metabarcoding for diet analysis and biodiversity: A case study using the endangered Australian sea lion (Neophoca cinerea)Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias.Comparison of diets for Largemouth and Smallmouth Bass in Eastern Lake Ontario using DNA barcoding and stable isotope analysis.Molecular detection of invertebrate prey in vertebrate diets: trophic ecology of Caribbean island lizards.Comparing the effectiveness of metagenomics and metabarcoding for diet analysis of a leaf-feeding monkey (Pygathrix nemaeus).Utilizing stomach content and faecal DNA analysis techniques to assess the feeding behaviour of largemouth bass Micropterus salmoides and bluegill Lepomis macrochirus.Ancient DNA from latrines in Northern Europe and the Middle East (500 BC-1700 AD) reveals past parasites and diet.Non-invasive multi-species monitoring: real-time PCR detection of small mammal and squirrel prey DNA in pine marten (Martes martes) scats Optimised scat collection protocols for dietary DNA metabarcoding in vertebrates Evaluation of plant contamination in metabarcoding diet analysis of a herbivore A metabarcoding approach for the feeding habits of European hake in the Adriatic Sea Deciphering mycorrhizal fungi in cultivated Phalaenopsis microbiome with next-generation sequencing of multiple barcodes

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DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches.

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DNA-based faecal dietary analy ...... oughput sequencing approaches.

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Belinda L Cannell

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Dáithí C Murray

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Jayne Houston

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Matthew I Bellgard

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Michael Bunce

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Rebecca Oliver

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Roberto A Barrero

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P2860

Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

A molecular analysis of dietary diversity for three archaic Native Americans

MEGAN analysis of metagenomic data

Basic local alignment search tool

Molecular diet analysis of two african free-tailed bats (molossidae) using high throughput sequencing.

EMBOSS: the European Molecular Biology Open Software Suite

Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis

The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing.

Molecular scatology as a tool to study diet: analysis of prey DNA in scats from captive Steller sea lions.

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