Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes. - Wikidata - awgldk - TriplyDB

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

http://www.wikidata.org/entity/Q31076879

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Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication Navigating the rapids: the development of regulated next-generation sequencing-based clinical trial assays and companion diagnostics Library construction for next-generation sequencing: overviews and challenges.A bumpy ride on the diagnostic bench of massive parallel sequencing, the case of the mitochondrial genome Structure and function of μ-conotoxins, peptide-based sodium channel blockers with analgesic activity Atypical mitogen-activated protein kinase phosphatase implicated in regulating transition from pre-S-Phase asexual intraerythrocytic development of Plasmodium falciparum Mitotic evolution of Plasmodium falciparum shows a stable core genome but recombination in antigen families Epithelial response to a high-protein diet in rat colon A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome Whole-genome sequencing in outbreak analysis Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers.Optimized Illumina PCR-free library preparation for bacterial whole genome sequencing and analysis of factors influencing de novo assembly Caught in the middle with multiple displacement amplification: the myth of pooling for avoiding multiple displacement amplification bias in a metagenome Sequencing platform and library preparation choices impact viral metagenomes.Effects of GC bias in next-generation-sequencing data on de novo genome assembly Characterizing and measuring bias in sequence data.Mitochondrial genome of Babesia orientalis, apicomplexan parasite of water buffalo (Bubalus babalis, Linnaeus, 1758) endemic in China.Methylated DNA is over-represented in whole-genome bisulfite sequencing data.Accurate typing of short tandem repeats from genome-wide sequencing data and its applications.RVD2: an ultra-sensitive variant detection model for low-depth heterogeneous next-generation sequencing data.The impact of library preparation protocols on the consistency of allele frequency estimates in Pool-Seq data Optimized whole-genome amplification strategy for extremely AT-biased template.Efficient depletion of host DNA contamination in malaria clinical sequencing.Streamlined analysis of duplex sequencing data with Du Novo.Improve homology search sensitivity of PacBio data by correcting frameshifts.Exploiting the great potential of Sequence Capture data by a new tool, SUPER-CAP.Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum Artificial miRNA inhibition of phosphoenolpyruvate carboxylase increases fatty acid production in a green microalga Chlamydomonas reinhardtii.An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage.Bioinformatics analysis of alternative polyadenylation in green alga Chlamydomonas reinhardtii using transcriptome sequences from three different sequencing platforms Single-cell genomics for dissection of complex malaria infections.Analysis of plant microbe interactions in the era of next generation sequencing technologies.Transcriptome of Pterospermum kingtungense provides implications on the mechanism underlying its rapid vegetative growth and limestone adaption Patterns of sequencing coverage bias revealed by ultra-deep sequencing of vertebrate mitochondria.De novo transcriptome analysis shows differential expression of genes in salivary glands of edible bird's nest producing swiftlets High-Density Genetic Linkage Map Construction and Quantitative Trait Locus Mapping for Hawthorn (Crataegus pinnatifida Bunge).Systematic analysis of gene expression patterns associated with postmortem interval in human tissues.An unclassified microorganism: novel pathogen candidate lurking in human airways Heterochromatin controls γH2A localization in Neurospora crassa.

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Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

http://www.wikidata.org/entity/Q31076879

description

2012 nî lūn-bûn

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2012 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2012 թվականի հունվարին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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name

Optimizing Illumina next-gener ...... r extremely AT-biased genomes.

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Optimizing Illumina next-gener ...... r extremely AT-biased genomes.

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type

label

Optimizing Illumina next-gener ...... r extremely AT-biased genomes.

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Optimizing Illumina next-gener ...... r extremely AT-biased genomes.

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prefLabel

Optimizing Illumina next-gener ...... r extremely AT-biased genomes.

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Optimizing Illumina next-gener ...... r extremely AT-biased genomes.

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Optimizing Illumina next-gener ...... or extremely AT-biased genomes

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Bronwyn Macinnis

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Daniel J Turner

http://www.w3.org/2001/XMLSchema#string

Michael A Quail

http://www.w3.org/2001/XMLSchema#string

Susana Campino

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Yong Gu

http://www.w3.org/2001/XMLSchema#string

P2860

DNA detection using recombination proteins

Genome sequence of the human malaria parasite Plasmodium falciparum

Fast and accurate short read alignment with Burrows-Wheeler transform

The Sequence Alignment/Map format and SAMtools

Artemis: sequence visualization and annotation

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

PlasmoDB: a functional genomic database for malaria parasites

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes.

BamView: viewing mapped read alignment data in the context of the reference sequence

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries.

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scholarly article

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10.1186/1471-2164-13-1

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13

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Dominic P. Kwiatkowski

Gareth L. Maslen

Harold Swerdlow

Samuel O. Oyola

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2012-01-03T00:00:00Z

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51980223

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1051998628

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